Gene Smed_6230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6230 
Symbol 
ID5320532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1151173 
End bp1152480 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content58% 
IMG OID640777834 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001314766 
Protein GI150378171 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAGG AAAAATTTGA CGCCATCGTC GTTGGTGCCG GTATGTCCGG GAATGCGGCG 
GCTTACGCGA TGGCTAGCCG TGGGCTAAAG GTGCTGCAGT TGGAGCGCGG AGAGTATCCG
GGTTCAAAGA ACGTCCAAGG CGCAATAATG TACGCCAACA TGCTGGAGGC AATCATTCCA
GATTTCCGGA ATGACGCACC GCTCGAGCGG CATCTCGTCG AGCAGCGATT CTGGATAATG
GACGACACGT CTCACACCGG GATGCACTAC CGGTCAGACG ACTTCAATGA GGTGACGCCA
AACCGCTACA CGATCATTCG CGCTCAATTC GATAAATGGT TATCGCGCAA GGTGTGCGAG
GCTGGCGGAA CGGTCCTGTG TGAAACAACG GCTACAGGAC TGGAATGGGA CAGTGCCGGG
AAGGCGATAG GCGTCCGCAC TGACCGCGCT GGCGACGTCG TTCTTGCAGA TGTGGTCGTG
CTCGCTGAAG GGGTCAACGG ACTCCTTGGC ACGCGCGCCG GCTTACGTGA GGTGCCGAAG
TCGAAAAACG TAGCCCTCGC GGTAAAGGAA TTGCATTTCC TCCCCGAAGA GGTGATCGCA
TCGCGCTTCG GACTGACAGG CGATGAAGGA TGCGTGATCG AGGCGGGCGG GACAATCTCG
CGCGGAATGG CAGGATTGGG CTTCCTCTAT ACCAATAAGG AGTCAATCTC ACTCGGCATC
GGCTGCCTCA TCTCCAACTT CGCCGAGACC ATGGAGAGAC CTTACGCGCT TCTCGACGCC
TTTAAACGCC ACCCGTCAAT CCAGCCGTTA ATAGCAGGGT CGGAAGTGAA GGAGTATGCG
GCCCATCTCA TTCCGGAGGG CGGTTTCAAC GCAATACCGC GGCTCTGCGG TAACGGCTGG
GTCGTCGTTG GAGACGCGGC GCAACTTAAC AATGCCGTGC ACCGCGAAGG GTCTAACCTT
GCCATGGCAT CTGGGAGGAT GGCGGGAGAG GCGATTTCAA TCATAAAGAG CCGCGGGGGG
GTGATGGATA AGGCGAGCCT CTCTCTCTAC AAAACGATAC TAGACAAGTC CTTCGTTGTT
GAGGACCTGA GCAAACAAAA GGACATGCCT TCCCTGCTCC ATACCAATTC CCCAAACTTC
TTCACGACGT ACCCGCAGCT GATATCGCAT GCCGCGCAGA ACTTCGTGCG CGTGGACGGC
ACGCCTAAGA TTGAGAGGGA AATTGCGACC ACCGCCGCCT TTCTCAGGGC ACGATCCCGA
TGGGGTCTCG TCAGTGACGC GGTTCGCCTC GCCTCCGCCT GGCGCTAA
 
Protein sequence
MTKEKFDAIV VGAGMSGNAA AYAMASRGLK VLQLERGEYP GSKNVQGAIM YANMLEAIIP 
DFRNDAPLER HLVEQRFWIM DDTSHTGMHY RSDDFNEVTP NRYTIIRAQF DKWLSRKVCE
AGGTVLCETT ATGLEWDSAG KAIGVRTDRA GDVVLADVVV LAEGVNGLLG TRAGLREVPK
SKNVALAVKE LHFLPEEVIA SRFGLTGDEG CVIEAGGTIS RGMAGLGFLY TNKESISLGI
GCLISNFAET MERPYALLDA FKRHPSIQPL IAGSEVKEYA AHLIPEGGFN AIPRLCGNGW
VVVGDAAQLN NAVHREGSNL AMASGRMAGE AISIIKSRGG VMDKASLSLY KTILDKSFVV
EDLSKQKDMP SLLHTNSPNF FTTYPQLISH AAQNFVRVDG TPKIEREIAT TAAFLRARSR
WGLVSDAVRL ASAWR