Gene Smed_6228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6228 
Symbol 
ID5320530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1149181 
End bp1150068 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content61% 
IMG OID640777832 
Productelectron transfer flavoprotein alpha/beta-subunit 
Protein accessionYP_001314764 
Protein GI150378169 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTTG TAGTCTGCAT AAAGCAGGTG CCGGATTCTG CACAAATACG CGTCCATCCG 
GTGACCAACA CGATCATGCG ACAGGGCGTG CCGACCATTA TCAACCCCCA TGACCTGGCT
GCCCTCGAAG AAGCACTGAA GTTGTGCGAG GCGTATGGAG GCGAGGTTAC CGTGGTGACC
ATGGGCCCTA AGATGGCCGA GGACGCGCTG CGCAAGGCAC TTACGTTTGG CGCACATCGC
GCCGTTCTCT TGACCGACCG CCATTTTGCA GGCTCGGATA CGCTCGCGAC CTCCTTCGCT
CTTGCTCAAG CAATCGCGGA GATCGGCGAG ACCTTCGGCA CGCCTGATGT TGTGTTCACC
GGCAAGCAGA CGATCGACGG CGACACTGCC CAAGTTGGAC CTGGAATTGC CAAGCGCCTC
GACCTACAGC AGCTCACTTA CGTGGCGAAG ATTCTCTCCA TTGATGCCGC TTCGCGCGAG
ATCACTGTTG AGCGGCGCGC GGAAGGCGGC TCGCAGATCC TGAGAACCAG ACTACCTTGC
CTTGTCACTA TGCTGGACGG CGCCGACGCC ATCCGTCGCG GGCGTCTCGA CGACGCCCTT
CGCGCCGCGC GCACCAAGGT CGTCAAGTGG AGTGCGGCGG ACGCCGGCAT TGCAGAACCG
GCCAACTGTG GCTTGCGAGG ATCCCCGACA GTCGTAAAGC GCGTGTTTGC CCCGACTTCG
CGCGAACAAA AGGCAAGGCA GATCGACACC ACAAATAAGC CACTGCGCGA GGTCGCGGAC
GGTCTGATCG CGGCAATCTT TGCCGACCAG CCGGCGTTGA AACACGATCT CGGCTTCCTA
GGCAGCACGG GACAGCAAGG AGTACCAGAT GTCGACCGAG AATCGTGA
 
Protein sequence
MHLVVCIKQV PDSAQIRVHP VTNTIMRQGV PTIINPHDLA ALEEALKLCE AYGGEVTVVT 
MGPKMAEDAL RKALTFGAHR AVLLTDRHFA GSDTLATSFA LAQAIAEIGE TFGTPDVVFT
GKQTIDGDTA QVGPGIAKRL DLQQLTYVAK ILSIDAASRE ITVERRAEGG SQILRTRLPC
LVTMLDGADA IRRGRLDDAL RAARTKVVKW SAADAGIAEP ANCGLRGSPT VVKRVFAPTS
REQKARQIDT TNKPLREVAD GLIAAIFADQ PALKHDLGFL GSTGQQGVPD VDRES