Gene Smed_6220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6220 
Symbol 
ID5320522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1139701 
End bp1139904 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content50% 
IMG OID640777825 
Producthypothetical protein 
Protein accessionYP_001314757 
Protein GI150378162 
COG category[S] Function unknown 
COG ID[COG5420] Uncharacterized conserved small protein containing a coiled-coil domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATC TTGAAGAACT GAGGAAACGG ATGCGGAAAC TGCAGTCGCG GGCCGGAACT 
GCAATGATGG AATTGCACGA CCTCGCAGAG GATCTTCCAA GTAAGTGGAC CGAAATCATG
GCAGTCGCGG AAAAAGCGTT TCGCGCTTTT GCTGAGTTGG ACGCTGTGAA AAGAGAACTT
GCTGAGTCGG AGAATGCACA ATGA
 
Protein sequence
MSDLEELRKR MRKLQSRAGT AMMELHDLAE DLPSKWTEIM AVAEKAFRAF AELDAVKREL 
AESENAQ