| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6199 |
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| Symbol | |
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| ID | 5320501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 1122133 |
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| End bp | 1123782 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777815 |
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| Product | transposase IS66 |
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| Protein accession | YP_001314747 |
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| Protein GI | 150378152 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3436] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.07824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGAGG CTGAGATCGC GCGGTTGGAG GCGGTTGAGA AGAGCGCCAA CGAGCGGATT
GCCAACCTGA CCTTGATCAT GAAGGTTTTG CAGCGCACGC AAAATGGCAA GCGCTCTGAG
CGGCTCCGCC TCGAGGTCAA TGACGAGCAG GTGTCCTTTG CCTTCGAAGA GGTCGAAACC
GGCCTATCGG CAATCCGCAG CGAACTCGAT CGCGCAGCCA AGGACAAGCC GAAGCGAGCG
CCGCGTCCGC GCAAGGGTTT TGCCGCCCAT CTCGAGCGCA TCGAAGAGGT CATCGAGCCG
GAAATCCCGG CCGGGTGCGA GGGGCTGGCA AAGGTTCTGA TCGGAGAGGA CCGCTCCGAG
CGGCTGGACG TCGTGCCGCC GAAGTTCAGG GTTATCGTGA CGCGTCGCCC CAAATACGCT
TTCCGGGGCA GCGACGGCGT GGTCCAGGCC CTGGCGCCGG CACACATCAT CGAAGGCGGC
CTGCCGACGG AACGGCTGCT CGCCTATATC GCCGTTTCCA AATACGCCGA TGGCCTTCCT
CTCTATCGGC AGGAAGCGAT CTATTTGCGT GATGGCGTCG AGATCAGCCG ATCGCTGATG
GCCCAATGGA TGGGGCATCT GCGCTTCGAA CTGCAGATGC TGGCCGATTA TATTCTGGAG
AGGGTCAAGG AGGGCGAAAG GATCTTTGCC GACGAGACGA CCCTACCCAC TCTTGCGCCC
GGTTCGGGCA AAACCACCAA GGCCTGGCTT TGGGCTTACG CACGCGACGA CCGCCCCTAT
GGCGGAACCA GTCCGCCGAT GGTGGCCTAT CGATTTGAAA ACAGCAGAGG TGCGGATTGC
GTGACGCGTC ATCTCTCCGG ATTCACCGGC ATCCTGCAAG TGGATGGCTA CTCGGCCTAT
ACTAATCTCG CCAAGACGCG GGCCAAAACC GGCAGCAACG AAACGGTCCA GCTTGCAGGA
TGTTGGGCAC ATCTACGGCG CAAGTTTTAT GACCTGCACA TCAGTGGAGT CTCGCAGGCC
GCCACAGACA CTGTCCTGGC AATGACCGAG CTCTGGCGCA TCGAGGATGA AGTTCGCGGT
AAGGATGCCG ACAGCCGCGC GGCCCGGCGC CAGGAGAAAT CCTCGACCAC CGTCGCCAGC
CTCTTCGAGC TCTGGGAAAA GGAACTGGGC AAAGTCTCGG GAAAATCCAA AACCGCCGAG
GCGATCCGCT ACGCGCTCAC CCGGCGCGAG GCGCTGGAGC GCTTTCTGAC GGACGGTCGC
ATCGAAATCG ACTCCAACAT CGTCGAACGG GCGATCAGGC CCCAAACGAT TACGAGAAAG
AATAGCCTAT TCGCCGGCAG CGAGGGCGGT GGACGAACTT GGGCGACGGT GGCCACCTTG
TTGCAGACGG CATTATGCCG CGCGCGGCAT AAGGCGGTTT ATGCCGACCG GCGAACTATG
CCGAGCACCT GCTCCAACAT ACCATTTGAA ACGCGCTTTT CTCGCCGTTT CCGCTGGAGA
TTTGTTGTAG GCACTCGGCA TAGTTCTCAT GCTCAGAGGG CATTCAGGAA TTCCAGAAGC
CGGTCGCTTG GTCGAAATCG CTCGGCCTTG GCGCGTTCGT ACGGCTTCAG CTTTGCGAGC
GCGGATTCCT TCAGTTCAAG ATGTGCATGA
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| Protein sequence | MAEAEIARLE AVEKSANERI ANLTLIMKVL QRTQNGKRSE RLRLEVNDEQ VSFAFEEVET
GLSAIRSELD RAAKDKPKRA PRPRKGFAAH LERIEEVIEP EIPAGCEGLA KVLIGEDRSE
RLDVVPPKFR VIVTRRPKYA FRGSDGVVQA LAPAHIIEGG LPTERLLAYI AVSKYADGLP
LYRQEAIYLR DGVEISRSLM AQWMGHLRFE LQMLADYILE RVKEGERIFA DETTLPTLAP
GSGKTTKAWL WAYARDDRPY GGTSPPMVAY RFENSRGADC VTRHLSGFTG ILQVDGYSAY
TNLAKTRAKT GSNETVQLAG CWAHLRRKFY DLHISGVSQA ATDTVLAMTE LWRIEDEVRG
KDADSRAARR QEKSSTTVAS LFELWEKELG KVSGKSKTAE AIRYALTRRE ALERFLTDGR
IEIDSNIVER AIRPQTITRK NSLFAGSEGG GRTWATVATL LQTALCRARH KAVYADRRTM
PSTCSNIPFE TRFSRRFRWR FVVGTRHSSH AQRAFRNSRS RSLGRNRSAL ARSYGFSFAS
ADSFSSRCA
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