Gene Smed_6198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6198 
Symbol 
ID5320500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1121736 
End bp1122008 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content59% 
IMG OID640777814 
ProductIS66 Orf2 family protein 
Protein accessionYP_001314746 
Protein GI150378151 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.501419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTAG TCAGAGATGG CGGTCTCGAC CCGTTCAACG GAGCGCTTTA TGTGTTCCGG 
TCGAAACGGG CGGACCGTGT TCGCATCGTC TGGTGGGATG GCAGCGGTGT CTGCCTCTAT
TCGAAAACCC TCGAGGAGCA GAGCTTTTGC TGGCCGGGCA TATCGGCCGC CAGGATACGT
CTGGACCATT CGCAATTAAT GGCGCTTCTG GCCGGTCTGG ATTGGAAGAA GATCCGGCCA
ACCAAGGTCA GACGGCCGTT GCTGACGGGC TGA
 
Protein sequence
MALVRDGGLD PFNGALYVFR SKRADRVRIV WWDGSGVCLY SKTLEEQSFC WPGISAARIR 
LDHSQLMALL AGLDWKKIRP TKVRRPLLTG