Gene Smed_6197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6197 
Symbol 
ID5320499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1121281 
End bp1121667 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content63% 
IMG OID640777813 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001314745 
Protein GI150378150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.578613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA GTGTGAATCA GCCACGAACA TTCGAGGTTT TGACGGCGGC GCCGGTGCGG 
GCGCGGCGCA AGCCGCGAGA CTGGCCGAAC GAGGAGAAGG AGCGCCTGAT TGCCGAGACG
TTGTTGCCTG GAGCCAATGT CTCTGCAATC GCGCGCGCTG AGGGATTGGA TCCCTCGCAG
CTTTACGGGT GGCGTCGCAA GGCACTGTCA TCGGGGTTGG TTGCGCCCCT GACGGAAACC
GCGAAGAAGG AGGTCAAGTT CGCGCGCGTT GAGCCGGTGG CAAGCTCTGC GGTCGAAATC
GTCCTCGGTG ATGTCGTGGT GCGCGTCGGC GGCGATATCG AGTCGGATCA CCTGGTGAAG
AAACTCCGAG CGGTCCGCAA GGCATGA
 
Protein sequence
MSDSVNQPRT FEVLTAAPVR ARRKPRDWPN EEKERLIAET LLPGANVSAI ARAEGLDPSQ 
LYGWRRKALS SGLVAPLTET AKKEVKFARV EPVASSAVEI VLGDVVVRVG GDIESDHLVK
KLRAVRKA