Gene Smed_6196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6196 
Symbol 
ID5320498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1119739 
End bp1120482 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content53% 
IMG OID640777812 
ProductNodH sulfotransferase 
Protein accessionYP_001314744 
Protein GI150378149 
COG category[S] Function unknown 
COG ID[COG4424] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.871142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATT CCACGCTGCC GCCTCAGCCA TTTGCAATCC TTGCGATGCC AAGGACCGGC 
ACACACTACT TGGAAGAACT AGTAAACGAG CATCCGAATG TTCTGAGTAA CGGTGAATTG
CTCAATACGT ACGACACGAA CTGGCCTGAC AAGGAACGCC TGCTACTCAG CGATCGAGAG
CTTCTGGAGC GTGCCTTCTT GCGCTATCCC CCACAAAGCG ACAAGAAGGT GACCCATGTG
GGTTGCAAGA TCAACGAGCC TCAGTTTCAG GAGCGTCCGA GTTTTTTTGC CGAGCTGACC
GCTTGGCCTG GACTTAAGGT TATCCTTGTG ATTCGCAGAA ACACATTAGA GTCGCTAAGA
TCGTTTGTGC AGGCAAGGCA AACCCGTCAG TGGCTCAAGT TCAATTCGGA CAATTCAACT
CCTCCACCGC CAGTGATGTT GCCATTCGCC ACCTGCGAAG CCTACTTCAA AGCTGCCGAC
GATTTCCACG CTCGAGTGGT GAACGCCTTT GAACCAAGCA GGATGCATTT AATCGAGTAC
GAGAGGCTTC TTCGCGATCC CCACGCTTGC GTGGCAACGG TCTTAGATTT CCTCGGGGCT
ACTGCCCTAC AGCTTTCTGA TCGCGGTATT CTCCAGCGTC AAGAGACGCG TCCGTTGGAC
CAAACGGTGC GGAACTTTCA TGAGTTGCGC GTTCACTTCG CGAATGGACC TTACGCGAGG
TTCTTTGAGC TTGGTAACGA CTGA
 
Protein sequence
MTHSTLPPQP FAILAMPRTG THYLEELVNE HPNVLSNGEL LNTYDTNWPD KERLLLSDRE 
LLERAFLRYP PQSDKKVTHV GCKINEPQFQ ERPSFFAELT AWPGLKVILV IRRNTLESLR
SFVQARQTRQ WLKFNSDNST PPPPVMLPFA TCEAYFKAAD DFHARVVNAF EPSRMHLIEY
ERLLRDPHAC VATVLDFLGA TALQLSDRGI LQRQETRPLD QTVRNFHELR VHFANGPYAR
FFELGND