| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6188 |
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| Symbol | |
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| ID | 5320490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 1110740 |
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| End bp | 1111528 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640777806 |
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| Product | ABC transporter |
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| Protein accession | YP_001314738 |
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| Protein GI | 150378143 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.657692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAAGC TTTATGTGGC GGCTCTGCCC GCCAACGGGT GGAACTGGAT TGCCGTGTGG
CGCCGCAATT ATCTCGCGTG GAAGAAGGTC GCGCTGGCGT CGATCCTCGG TAACCTGGCC
GACCCCTTAA TATATCTGTT CGGTCTGGGT GCCGGCTTAG GAATGATGGT CGGGCGCGTT
GACGGTGTGT CGTACATTGC ATTTTTGTCT GCCGGGATGG TCGCGACAAG CGCAATGACC
GCGTCGACTT TCGAAACGAT CTACGCGACT TTCGCCCGCA TGCGCGCTCA GCGCACCTGG
GAAGCGATCC TGCACACACA GGTCACGATC GGCGACATCG TGCTCGGAGA ATTGGCGTGG
GCAGCTACCA AGGCTTCCCT TGCGGGTACA GGAATTGGTG TCGTCGCCGC TACGCTGGGC
TACACGGAAT GGGTGTCACT CCTTTATGCA CTGCCGGTCA TCGCCCTGAC GGGCTTAGCG
TTTGCGAGTC TAGCCATGAT CGTCACGGCG CTTGCACCCA GCTACGAATA TTTCATATTT
TATCAGACGC TCGTCATCAC ACCGATGCTG TTCCTGTCCG GCGCTGTCTT TCCAGTCAAC
CAGCTGCCGA GCGCTTTTCA ACATGTCACA CGAGTCTTGC CGCTGGCTCA TTCGATTGAT
GTCATCCGTC CGATAATGCT CGGCAGCCCG CTGGTCAACG TGGGTCTACA TATCGGGGCT
CTTTGCTGCT ATGCAGTAGT CCCGTTTTTC TTGTCGACTG CATTGCTCCG CCGACGCCTG
ATGCCTTAA
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| Protein sequence | MWKLYVAALP ANGWNWIAVW RRNYLAWKKV ALASILGNLA DPLIYLFGLG AGLGMMVGRV
DGVSYIAFLS AGMVATSAMT ASTFETIYAT FARMRAQRTW EAILHTQVTI GDIVLGELAW
AATKASLAGT GIGVVAATLG YTEWVSLLYA LPVIALTGLA FASLAMIVTA LAPSYEYFIF
YQTLVITPML FLSGAVFPVN QLPSAFQHVT RVLPLAHSID VIRPIMLGSP LVNVGLHIGA
LCCYAVVPFF LSTALLRRRL MP
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