| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6157 |
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| Symbol | |
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| ID | 5320459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 1081539 |
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| End bp | 1082426 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640777784 |
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| Product | type IV secretion system protein VirB6 |
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| Protein accession | YP_001314716 |
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| Protein GI | 150378121 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0688028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCT CAGTATCTGC GCCTTTTACG ACTATACACA CGGTCTTCGA TACCGCCTTT
ACAATCGCAC TGGACTCAGT GCTCGAAAAA ATCCAGAGCG CAATCAATGC CCCTCTGGTT
GCGTGCGTTA CGCTTTGGAT CATAGTCCAG GGCATTCTGG TGATACGTGG CGAAATCGAT
GCTCGTGTTG GGATCATGAA GATCATCAGA GTATCGATCG TTGTAGCCCT TATCTTGGGC
CAGGCTAACT ATCACTCTTA TGTAGTATTA TTCTTCGAGG ATACTATACC TAATTTCGTT
CACAAAATCA GCGGTAGTAG TATTGCGCTG ATTAATATCC CGCAACAGCT CGACCTGATG
TTTGCGTTAA GTCTGAGCTC GTTTCAGAAG ATTGCGGCCG AAATAGGACC AATGAATAGC
CAAGACATTC TCGCCTTTGA AGGCGCACAG TGGGTTTTTT ACGGTGCGCT TTGGGTAACG
TTCGAGGTCT ATGATGCCTG TGGGATTCTT ACTAAGGTAC TATTAGCGAT CGGTCCGCTG
ATCCTGGTCG GCTATCTCTT TGATCACACC CGCGACATGG CTTCAAAATG GGTCGGCCAG
CTCCTCTCTT ACGGGCTGCT GCTTCTCCTG TTGAACATCG TGGCGACCAT CGTCATAACA
ACGGAAGTAG TGGCTCTCAA ACTAATGCTC ATTGTGATCA ACAATGCGGG CACGACGGCA
GCCAAGATTA TCGGGCTTTA TGAACTCGAC ATGCTCTTTC TAGCTGGGGA CGCCCTGATC
GTCGCGCTTC CGGTGATCGC GGGCAATATT GCAGGTGCTC ATTGGTCAGG CTCGAATAAA
TCTCTCAGCA GCCTTAGCCG CCAGTTGGCC CAAGTTGCGC GCCGTTGA
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| Protein sequence | MKFSVSAPFT TIHTVFDTAF TIALDSVLEK IQSAINAPLV ACVTLWIIVQ GILVIRGEID
ARVGIMKIIR VSIVVALILG QANYHSYVVL FFEDTIPNFV HKISGSSIAL INIPQQLDLM
FALSLSSFQK IAAEIGPMNS QDILAFEGAQ WVFYGALWVT FEVYDACGIL TKVLLAIGPL
ILVGYLFDHT RDMASKWVGQ LLSYGLLLLL LNIVATIVIT TEVVALKLML IVINNAGTTA
AKIIGLYELD MLFLAGDALI VALPVIAGNI AGAHWSGSNK SLSSLSRQLA QVARR
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