| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6155 |
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| Symbol | |
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| ID | 5320457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 1080639 |
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| End bp | 1081352 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640777782 |
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| Product | type IV secretion system protein VirB8 |
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| Protein accession | YP_001314714 |
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| Protein GI | 150378119 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.141854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGCG CTGAACATGC TCTCCTGGTG GAGCGAGGAG CGCTTGCCGC GCACTATATT
GAAGTAGAGG CCTTCCAAAC GTCACGTGCG AAGTCGGCGC GGCGTCTTTC CAGGGTTCTG
GTCGTCATTG CGACGGCGGC TGTTTTTGGA AATATCGCGC AGGCCTTCAC CATCGCGACT
ATGGTTCCGC TTGCCAAGCT CGTGCCTGTG TATCTCTGGG TACGACCGGA TGGAACCGTT
GACAGCGAAG TGTCCGTGTC TCGACTTCCC GCAACGCAAG AACAGGCCGT TATCAACGCT
TCACTCTGGC AATATGTCCG TCTGCGCGAG GGGTATACAG CCGACACAGC TCAATACGCC
TATGATCTCG TATCGAGCTT CAGCGCACCA TCTGTGCGCC TGGAATATCA GCATCACTTT
AATTACCCTA ATCCGACGTC ACCGCAGGTC ACAATCGGTG AGGGGGGGAG ACTAGATGTC
GAGCACATCT CCTCAAATGA TATTGCGACG GGCGTGCAGC AGATTCGTTT CAACCGAACG
CTCATGATGG ATGGCCAGAC GCCGGTGATG AGTACATGGA CTGCAACGGT CCGGTATGAA
AAGGTGACAA GCCTGTCCGG TGAATCGAGA CTGTCCAACC CAGGGGGGTT GACTGTTACC
TCCTACCAAG TCTCGGAAGA CACCGTATGG AACGAGGGGC GTAGCGAGCA ATGA
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| Protein sequence | MKSAEHALLV ERGALAAHYI EVEAFQTSRA KSARRLSRVL VVIATAAVFG NIAQAFTIAT
MVPLAKLVPV YLWVRPDGTV DSEVSVSRLP ATQEQAVINA SLWQYVRLRE GYTADTAQYA
YDLVSSFSAP SVRLEYQHHF NYPNPTSPQV TIGEGGRLDV EHISSNDIAT GVQQIRFNRT
LMMDGQTPVM STWTATVRYE KVTSLSGESR LSNPGGLTVT SYQVSEDTVW NEGRSEQ
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