| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6152 |
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| Symbol | |
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| ID | 5320454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 1077566 |
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| End bp | 1078606 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640777779 |
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| Product | type IV secretion system protein VirB11 |
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| Protein accession | YP_001314711 |
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| Protein GI | 150378116 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | [TIGR02788] P-type DNA transfer ATPase VirB11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCG AGGCAGATCC TCAACTGCGT TTGCTCCTCA AACCAGTACT AGAATGGCTT
GAGGACCCAA GGACCGAAGA GGTCGCGATT AATAGACCAG GAGAGGCTTT CGTCCGGCAA
GCCGGAGCGT TTACGAAACA TCCTCTATCT CTGACCTATG ACGATCTCGA AGATATCGCG
ATCTTAGCGG GAGCGCTACG AAAGCAAGAT GTTGGACCAC GAAGCCCTCT CTGCGCCACC
GAGTTGCCAG GCGGAGAGCG GCTGCAGATT TGTTTACCGC CAGCAGTTCA GTCAGGTACC
GTCAGCCTGA CGATCCGCCG CCCATCTTCT CGCGTTTCGG AACTTAAGGA AGTCTCATCT
CGCTATGACG CTTCGCGCTG GAATCAATGG CGCTTCCGCC AGGAGCGCCA AACGCAACAG
GATATGCAGA TCCTTGAGCA TTACGCCCGC GGTAATTTGG AAGAATTCCT GCAAGCGTGC
GTGACTGGGC GGCTGACGAT GCTGCTTTGC GGCCACACGG GTAGCGGCAA GACGACGATG
AGCAAGACTT TGATTAACGC CATTCCGCCG CAGGAAAGGC TGATCACCAT AGAGGACACG
CTCGAGCTCG TGATTCCACA TGAGAATCAT GTCCGGCTAC TTTATTCGAA GGATGGGGCA
GGAGTAGGTG GGGTGACCGC GGAGCAGCTT CTACAAGCCA GTCTCCGCAT GCGGCCGGAC
CGAATACTGC TCGGCGAGAT GCGCGACGAT GCCGCTTGGG CATATCTCAG CGAAGTGGTA
TCTGGCCATC CAGGATCAAT CTCGACTATT CACGGAGCCG ATGCCGTCCA AGGTTTCAAG
AAGCTCTTTT CGCTCGTCAA GAGCAGCCCA CAAGGAGCTG CCATAGAGGA CCGTACGCTG
ATTGACATGC TATCGGCGGC CATCGATGTC ATCGTGCCGT TCCGGACCTA CGGTGACGTC
TACGAAGTTG GCGAGATTTG GCTGGCGGCC GACGCGCGTC GACGCGGAGA AACAGTCGCT
GGTCTTCTGG ACCAGCATTA G
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| Protein sequence | MQTEADPQLR LLLKPVLEWL EDPRTEEVAI NRPGEAFVRQ AGAFTKHPLS LTYDDLEDIA
ILAGALRKQD VGPRSPLCAT ELPGGERLQI CLPPAVQSGT VSLTIRRPSS RVSELKEVSS
RYDASRWNQW RFRQERQTQQ DMQILEHYAR GNLEEFLQAC VTGRLTMLLC GHTGSGKTTM
SKTLINAIPP QERLITIEDT LELVIPHENH VRLLYSKDGA GVGGVTAEQL LQASLRMRPD
RILLGEMRDD AAWAYLSEVV SGHPGSISTI HGADAVQGFK KLFSLVKSSP QGAAIEDRTL
IDMLSAAIDV IVPFRTYGDV YEVGEIWLAA DARRRGETVA GLLDQH
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