| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6125 |
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| Symbol | |
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| ID | 5320427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 1050875 |
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| End bp | 1051744 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640777760 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001314692 |
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| Protein GI | 150378097 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.950475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCCGTC TGGCTGGTGT TAGCCGGGCG GGGTACTACC GGTACTGGCA GCAATCAGCG
CCGCGTCAGG AAGAAACCGG TCTACGAGAT GTCATTCAAA GGCTGGCCTT GGCCAATCGG
CATTATGGAT ATCGCCGGAT TGGCGCTCTT CTGGGCCGGG AGGGCTGGCA GGCGAACCAC
AAACGTGTGT TGCGTTTGAT GGGAGAGGAC AATCTCTTAT GTTTGCGCAA TCGGCCGTTC
GTACCCCGGA CCACCGATTC CAAGCATAGC TGGCGCGTCG TCCCAAACCT GGCTCGGGGG
ATGGAACTGA CAGGGATTAA CCAGCTTTGG GTCGCAGACA TCACCTATCT GCACCTTGCC
GAGCAGTTCG CTTATTTGGC GTTTGTGCTC GATGCCTTCA GCCGCATGGT CATCGGGTGG
GCACTGGAAC TTCACTTGCG AGCCAGCCTT GCAGTCGACG CCCTGAAAAT GGCGATCTCC
GCACGCGCTC CAGTCGCGGG CAGTTTAATT CACCACTCGG ACAGGGGAGT TCAATACGCT
TGCAGCAGCT ATTCTGACAT CCTCCACGCG CATGGGATCC AGCCGAGTAT GAGCCGGGTG
GGCAATCCGT ATGACAATGC GCGTGCGGAG AGCTTCATGA AAACCTTGAA GCAGGAAGAA
GTTGCAGGAT TGGCTTATCG CGATGCCTCG GACGCCCGGC GACGTATCGC CAGCTTCATT
GAAGACGTTT ACAATCGGCA ACGATTGCAT TCAGCGCTCG ATTACCTCAC CCCAGAGGAA
TACGAACAAT CCTTATCGTC GTCGCACGCA AGTGCCGTAC CTGAACTCAC AAGCCGGCAA
TTGTCCTGCA ATTTCTCTGT CTCACTGTAA
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| Protein sequence | MCRLAGVSRA GYYRYWQQSA PRQEETGLRD VIQRLALANR HYGYRRIGAL LGREGWQANH
KRVLRLMGED NLLCLRNRPF VPRTTDSKHS WRVVPNLARG MELTGINQLW VADITYLHLA
EQFAYLAFVL DAFSRMVIGW ALELHLRASL AVDALKMAIS ARAPVAGSLI HHSDRGVQYA
CSSYSDILHA HGIQPSMSRV GNPYDNARAE SFMKTLKQEE VAGLAYRDAS DARRRIASFI
EDVYNRQRLH SALDYLTPEE YEQSLSSSHA SAVPELTSRQ LSCNFSVSL
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