Gene Smed_6103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6103 
Symbol 
ID5320405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1035973 
End bp1036251 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content59% 
IMG OID640777743 
ProductthiamineS protein 
Protein accessionYP_001314675 
Protein GI150378080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.125716 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC TGACAGTGAT TGTCCCACCC TCGATCCGGC CATATGTCGG GGGTCAATCG 
CGCATCACAG TTGAGGCCCA AACCGTGCGC GAGGCGCTGG GCGCCATGTC CGCCAAATCC
GCGCAATTGA AGGAGCATTT GTTCGACTCG AAAGGCGAGA TCAATCGCTT TGTTCGGATT
TTTGTCAACG GACGGCCCGT GCCGCTCGGA TCGCGCGGCG ATGAAGCCGT CGAAAACGGC
GCGGAGATAG CGGTCGTGTT GGCGCTGGCT GGAGGTTGA
 
Protein sequence
MQQLTVIVPP SIRPYVGGQS RITVEAQTVR EALGAMSAKS AQLKEHLFDS KGEINRFVRI 
FVNGRPVPLG SRGDEAVENG AEIAVVLALA GG