| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6084 |
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| Symbol | groEL |
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| ID | 5320386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 1017063 |
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| End bp | 1018700 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777729 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001314661 |
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| Protein GI | 150378066 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.879265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCTA AAGAAGTCAA GTTCGGCCGT AGCGCGCGCG AAAAGATGCT GCGCGGCGTC
GACATCCTCG CCGACGCAGT CAAGGTGACG CTCGGCCCGA AGGGCCGCAA CGTCGTCATC
GACAAGTCGT TCGGCGCGCC GCGCATCACC AAGGACGGCG TCACCGTGGC CAAGGAGATC
GAACTCGAAG ACAAGTTCGA GAACATGGGC GCCCAGATGG TCCGCGAAGT CGCTTCGAAG
ACCAACGACA TTGCCGGTGA CGGCACGACG ACTGCAACCG TTCTCGCTCA GGCAATCGTT
CGCGAAGGCG CGAAGGCCGT TGCCGCCGGC ATGAACCCGA TGGACCTTAA GCGCGGTATC
GACCTCGCCG TCGCGGAAGT CGTCAAGGAC CTGCTCGCCA AGGCCAAGAC GATCAACACC
TCGGACGAAG TCGCCCAGGT CGGCACGATC TCGGCAAACG GCGAAAAGCA GATCGGTCTC
GACATTGCGG AAGCGATGCA GAAGGTCGGC AACGAAGGCG TCATCACGGT TGAAGAAGCC
AAGACCGCCG AGACCGAGCT CGAAGTCGTC GACGGCATGC AGTTCGACCG CGGCTACCTG
TCGCCCTACT TCGTCACCAA CCCGGAAAAG ATGGTCGCCG ACCTCGAAGA CGCTTACATT
CTCCTGCACG AGAAGAAGCT GTCGAACCTG CAGGCGATGC TCCCGGTTCT CGAAGCCGTC
GTCCAGACCG GCAAGCCGCT CCTCATCATT GCTGAAGACG TCGAAGGCGA AGCACTCGCA
ACGCTCGTCG TCAACAAGCT GCGTGGCGGC CTGAAGATCG CTGCCGTCAA GGCCCCGGGC
TTCGGCGACC GCCGCAAGGC CATGCTCGAA GACATCGCCA TCCTGACGGG CGGCACGGTG
ATCTCGGAAG ACCTCGGCAT CAAGCTCGAA AGCGTCACGC TCGACATGCT CGGCCGTGCG
AAGAAGGTTT CGATCACCAA GGAAAATACG ACGATCGTCG ACGGTGCCGG CCAGAAGTCC
GACATCGAAG GCCGCGTCGC CCAGATCAAG GCCCAGATCG AAGAAACCAC TTCCGACTAC
GACCGTGAGA AGCTGCAGGA GCGCCTTGCC AAGCTCGCTG GCGGCGTTGC CGTCATCCGC
GTCGGCGGTG CGACGGAAGT CGAAGTGAAG GAAAAGAAGG ACCGCATCGA CGACGCTCTC
AACGCGACGC GCGCTGCAGT TCAGGAAGGC ATCGTACCGG GCGGCGGCGT TGCTCTGCTG
CGTTCCTCCG TCAAGATCAC CGTCAAGGGT GAAAACGACG ACCAGGATGC CGGCGTCAAC
ATCGTTCGCC GCGCTCTGCA GTCTCCGGCC CGCCAGATCG TCGAAAACGC TGGCGACGAA
GCATCCATCG TCGTCGGCAA GATCCTCGAG AAGGACACCG ACGACTTCGG TTACAACGCA
CAGACCGGCG AATATGGCGA CATGATCGCC ATGGGCATCA TCGACCCGGT CAAGGTCGTT
CGCACCGCGC TCCAGGACGC AGCCTCGGTT GCTTCGCTGC TCATCACCAC CGAAGCCATG
ATCGCCGAGC TGCCGAAGAA GGACGCTCCG GCAATGCCTG GCGGCATGGG CGGCATGGGC
GGCATGGACA TGATGTGA
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| Protein sequence | MAAKEVKFGR SAREKMLRGV DILADAVKVT LGPKGRNVVI DKSFGAPRIT KDGVTVAKEI
ELEDKFENMG AQMVREVASK TNDIAGDGTT TATVLAQAIV REGAKAVAAG MNPMDLKRGI
DLAVAEVVKD LLAKAKTINT SDEVAQVGTI SANGEKQIGL DIAEAMQKVG NEGVITVEEA
KTAETELEVV DGMQFDRGYL SPYFVTNPEK MVADLEDAYI LLHEKKLSNL QAMLPVLEAV
VQTGKPLLII AEDVEGEALA TLVVNKLRGG LKIAAVKAPG FGDRRKAMLE DIAILTGGTV
ISEDLGIKLE SVTLDMLGRA KKVSITKENT TIVDGAGQKS DIEGRVAQIK AQIEETTSDY
DREKLQERLA KLAGGVAVIR VGGATEVEVK EKKDRIDDAL NATRAAVQEG IVPGGGVALL
RSSVKITVKG ENDDQDAGVN IVRRALQSPA RQIVENAGDE ASIVVGKILE KDTDDFGYNA
QTGEYGDMIA MGIIDPVKVV RTALQDAASV ASLLITTEAM IAELPKKDAP AMPGGMGGMG
GMDMM
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