Gene Smed_6054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6054 
Symbol 
ID5320356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp1000737 
End bp1001462 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content60% 
IMG OID640777708 
Productmethyltransferase type 11 
Protein accessionYP_001314640 
Protein GI150378045 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.202203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAATC GACACAGAGC GGGCGGCTAC GACAGCATCC GAATTAATCG CGACGGCCAG 
GCAGAAGCCT TCGATGCCAT TGGCGCTCAC TATGATGAAG CCTTTCCAAA CAAACAGGGT
CAAGTCTCAG CGGGCGATTG GCTGATCAGG TCCTTGCCGA CCGGGGCTCG GGTTCTGGAT
CTGGGCTGCG GTACCGGCGT GCCAACTGCG CGCCAGCTCG TGGTCTCCGG TTTCGAGGTC
GTGGGGATCG ATCTGTCAGT CGGAATGGTG AAACTCGCCC GGGAGTGTGT CCCCGGCGCG
ACATTCCACC AGATGGACAT TGCCGACTTG CGACCAGGTG GACCGCGGGA ACTCGGCCAG
TTCGACGCTG TCGCGGCCTT CTTCTCGCTG CTAATGCTGC CCCGTGCGGA GATTCCCCTC
GCACTGCTGA CGATTCGCAA TCTGCTGGTC CCTGGTGGCC TGTTCGCCCT ATCCATGGTG
GAGGCCGATG TCGACGATTT CTCAATCCCC TTCCTCGGAA ACAACATCCG AGTCTCCGGC
TATCTGCGGG AGGATCTGCG GGCGATCATC GCTGAGGCTG GCTTCCAAAT AGTGGAGGAG
ACCTCCTACA GCTATGCCAC GGCTGTCGGT GTGCCGCCGG AAGAACAGAT CTTCCTATGC
TGTCGTATGG GCTTTTCGCG CAGCGGATCG ATGAGCATCT CCAGCGTCGG AAAGTCGGCG
ATGTAG
 
Protein sequence
MDNRHRAGGY DSIRINRDGQ AEAFDAIGAH YDEAFPNKQG QVSAGDWLIR SLPTGARVLD 
LGCGTGVPTA RQLVVSGFEV VGIDLSVGMV KLARECVPGA TFHQMDIADL RPGGPRELGQ
FDAVAAFFSL LMLPRAEIPL ALLTIRNLLV PGGLFALSMV EADVDDFSIP FLGNNIRVSG
YLREDLRAII AEAGFQIVEE TSYSYATAVG VPPEEQIFLC CRMGFSRSGS MSISSVGKSA
M