Gene Smed_6044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6044 
Symbol 
ID5320346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp993016 
End bp993696 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content60% 
IMG OID640777703 
Productflavin reductase domain-containing protein 
Protein accessionYP_001314635 
Protein GI150378040 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.347531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.729214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGG ACGTTTTCGA CCCGAGAGCT TTGCGCGAGG CGTTTGGAGC GTTTCCAACC 
GCAGTGACGG TCATAACAGC CAGCGATCCG GCGGGCAGGC CGGTTGGTTT CACTGCCAAC
TCCTTTACGT CTGTATCCTT GGATCCGCCG CTGCTGCTCG TTTGCGTTGC CAAGACTGCG
CGCGACTACC CAGCAATGAC CGCAGCCGAG CACTTCGCGA TCAACATTCT GTCAGAGGCC
CAGAAGGATG TGTCCATTAA ATTTGCCCGC CCCGCCGAAG ATCGCTTCGC TGCTGTCGGC
TGGGGGAGGG GTCCGAACGG CTGTCCGATA TTCGCGCAGG TGGCCGCGTG GTTTGAATGT
TCGATGCATG ATGTCATCGA GGCGGGCGAC CATGTCATGA TGGTCGGTCG CGTGACGGCC
TTCGAAAGCA GCGGCTTGAA TGGTCTGGGC TATGCTCGCG GCGGCTACTT CACTCCAGGA
GCCAATTCCT CTGCAGCGGG CGGAGAGATC GGCGCCGTCG CGGTGTTGGA GCGCCACGGC
GCGCTTTTCC CATTGGGCGA CCAAAATCTG GCTCTTCCGA GTTACAGCGC CGGAAGCGGT
GACCCGGCAA AGACGCTGGC GTCCCAACTC GAACAATTGG GACTGAGCGT CCACGATTGG
TTTTCTCTGT TTGATCTTTA A
 
Protein sequence
MKADVFDPRA LREAFGAFPT AVTVITASDP AGRPVGFTAN SFTSVSLDPP LLLVCVAKTA 
RDYPAMTAAE HFAINILSEA QKDVSIKFAR PAEDRFAAVG WGRGPNGCPI FAQVAAWFEC
SMHDVIEAGD HVMMVGRVTA FESSGLNGLG YARGGYFTPG ANSSAAGGEI GAVAVLERHG
ALFPLGDQNL ALPSYSAGSG DPAKTLASQL EQLGLSVHDW FSLFDL