Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6044 |
Symbol | |
ID | 5320346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 993016 |
End bp | 993696 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640777703 |
Product | flavin reductase domain-containing protein |
Protein accession | YP_001314635 |
Protein GI | 150378040 |
COG category | [R] General function prediction only |
COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.347531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.729214 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCGG ACGTTTTCGA CCCGAGAGCT TTGCGCGAGG CGTTTGGAGC GTTTCCAACC GCAGTGACGG TCATAACAGC CAGCGATCCG GCGGGCAGGC CGGTTGGTTT CACTGCCAAC TCCTTTACGT CTGTATCCTT GGATCCGCCG CTGCTGCTCG TTTGCGTTGC CAAGACTGCG CGCGACTACC CAGCAATGAC CGCAGCCGAG CACTTCGCGA TCAACATTCT GTCAGAGGCC CAGAAGGATG TGTCCATTAA ATTTGCCCGC CCCGCCGAAG ATCGCTTCGC TGCTGTCGGC TGGGGGAGGG GTCCGAACGG CTGTCCGATA TTCGCGCAGG TGGCCGCGTG GTTTGAATGT TCGATGCATG ATGTCATCGA GGCGGGCGAC CATGTCATGA TGGTCGGTCG CGTGACGGCC TTCGAAAGCA GCGGCTTGAA TGGTCTGGGC TATGCTCGCG GCGGCTACTT CACTCCAGGA GCCAATTCCT CTGCAGCGGG CGGAGAGATC GGCGCCGTCG CGGTGTTGGA GCGCCACGGC GCGCTTTTCC CATTGGGCGA CCAAAATCTG GCTCTTCCGA GTTACAGCGC CGGAAGCGGT GACCCGGCAA AGACGCTGGC GTCCCAACTC GAACAATTGG GACTGAGCGT CCACGATTGG TTTTCTCTGT TTGATCTTTA A
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Protein sequence | MKADVFDPRA LREAFGAFPT AVTVITASDP AGRPVGFTAN SFTSVSLDPP LLLVCVAKTA RDYPAMTAAE HFAINILSEA QKDVSIKFAR PAEDRFAAVG WGRGPNGCPI FAQVAAWFEC SMHDVIEAGD HVMMVGRVTA FESSGLNGLG YARGGYFTPG ANSSAAGGEI GAVAVLERHG ALFPLGDQNL ALPSYSAGSG DPAKTLASQL EQLGLSVHDW FSLFDL
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