Gene Smed_6027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6027 
Symbol 
ID5320329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp978191 
End bp979300 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content62% 
IMG OID640777692 
Productoxidoreductase molybdopterin binding 
Protein accessionYP_001314624 
Protein GI150378029 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0144452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACAC CAGAGCGACC CAGTCTAATA GTTCGACAGA AATCCCCACA GAACATCGAG 
TTTCCGTTTG CGTCGCTCTC CGATTGGCTG ATCCCAACCG AGCTGTTCTT CGTGCGAAAC
CATTTCGCGT CGCCGGACCT CGATGCGCGA GACTGGAGAT TGCGCGTTGG CGGGGCGGTG
GAGCGGCCAA TCGAACTTGA CCTCGACAGC ATCAAGGCGA TGCGGAGCAC GACTTTCACC
GCCGTCGTCG AGTGCGCAGG GAACGGGCGC GTCTACTATG AGCCGCCGAA GGAGGGGTTG
CAGTGGCAAA ACGGAGCCGT CGGCAATGCC GCGTGGACAG GTGTTCTTCT GCGCGAGATT
TTGGAAGTGG CGGGCGTTAA GCGAACCGCA CGTGAGGTTC TGCTCGTAGG CGCAGACAGC
GGCGTCGTCG ACGCGAACAA GAAAACGGCT TCTCCCGGCC CCATCGCTTT TGCGCGCAGT
TTACCGCTTG AGAAGGCAAT GGCTCACAGC ACGATTCTTG CCTATTCGAT GAACGAGGAG
GCGTTGACGC GCGATCACGG CTACCCGCTA CGCGCGGTCG TGGGTGGCTG GTTCGGCATG
GCTTGGGTTA AGTGGATCAC GCATATCACG GTTGTGGAGC AACCGTTCCT TGGCTACTGG
CAGGCGCGCG ACTATTTCCG TTGGGAGCGC AGCCTCGGGG AACCCAGGCT CGTCCCGCTT
GCGGAGATGG AGGTCAAAGC ACAGATCGCG CGTCCCGTGC AGGGGGCGCA TCTCATCGCC
GGCCAACCGT ATCGGATTTT CGGAGCCGCC TGGAGCGGAG AGGCTGTTAT CCGGCAGGTG
CAGGTCTGCA CCGGCGATGG CAGGGGCTGG CGCGAGGGAA GGCTCCTCGA AACAGAACGT
CCCTTTGCAT GGCGCTTGTG GGAGTACATG TGGACCCCTG AAGAAGTCGG GCGGTATGTA
CTGCGATGTC GCGCGATCGA TGGGGCGGGG CGCGTGCAGC CCGAGCTCCC GCGTTCCGAC
TGCGAGAGCT ACGCGGCCAA TTGGATCGTT CCGGTGGAGG TTACGGTCGT TCCCGAGCCA
CAGACGTACG AGGAGGAATT CGTGATCTAA
 
Protein sequence
MPTPERPSLI VRQKSPQNIE FPFASLSDWL IPTELFFVRN HFASPDLDAR DWRLRVGGAV 
ERPIELDLDS IKAMRSTTFT AVVECAGNGR VYYEPPKEGL QWQNGAVGNA AWTGVLLREI
LEVAGVKRTA REVLLVGADS GVVDANKKTA SPGPIAFARS LPLEKAMAHS TILAYSMNEE
ALTRDHGYPL RAVVGGWFGM AWVKWITHIT VVEQPFLGYW QARDYFRWER SLGEPRLVPL
AEMEVKAQIA RPVQGAHLIA GQPYRIFGAA WSGEAVIRQV QVCTGDGRGW REGRLLETER
PFAWRLWEYM WTPEEVGRYV LRCRAIDGAG RVQPELPRSD CESYAANWIV PVEVTVVPEP
QTYEEEFVI