Gene Smed_6020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_6020 
Symbol 
ID5320322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp973891 
End bp974157 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content58% 
IMG OID640777687 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001314619 
Protein GI150378024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.02017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAT CGAAGTTTAC GGAAGAGCAA ATCATTTCGA ACCTGCGCGA GCAGGAGGCA 
GGGGCAAAGA CGGCGGAGCT TTGCCGCAAG CATGGCATGT CGGAAGCGAC CTTCTATGCC
TGGAGGGCCA AGTTCGGCGG CATGGATGTT TCCGATGCGA AGCGGCTGAA GGTCTTGGAG
GAAGAGAATG CCAGGCTGAA GCGGCTTTTG GCGGAGGCGA TGCTGGGTCA GGCGGCGTTG
AAGGACCTTT TGTCCCGAAA GTGGTGA
 
Protein sequence
MKRSKFTEEQ IISNLREQEA GAKTAELCRK HGMSEATFYA WRAKFGGMDV SDAKRLKVLE 
EENARLKRLL AEAMLGQAAL KDLLSRKW