Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_6008 |
Symbol | |
ID | 5320310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 964811 |
End bp | 965716 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640777682 |
Product | glutamine amidotransferase class-II |
Protein accession | YP_001314614 |
Protein GI | 150378019 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0067] Glutamate synthase domain 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.362161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00354269 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTGCGGCA TTGTGGGTTT GTTCCTGAAA GACAAGAGGC TGGAGCCCCA ACTTGGGGCC CTGTTGTCGG ACATGCTGAT CACCATGACC GATCGCGGAC CGGATTCTGC CGGCATCGCA ATCTATGGCG GCACGGCCGA CGGCAAAGCA AAGGTGACGA TCCAGTCTGC CGATCCTGCA ACCGATTTCG CCGGCCTCGA CGCCGATCTG GTGAATGCCG GCATCGACGC CGCCGTCACG GTCAAGAGCA CCCACGCGGT GATCGAGATC GCAGCGTCCC GGCTTGGCGA GATCCGCGCG ATCCTCGGTG AAATCCGCCC GAACACCCGC ATCATGGGTT CGGGAGAAAG CGTCGAGATC TTCAAGGAAA TCGGCCTGCC GAAGGATGTC GTCTCCCGCT TCGATGTGCG CTCGATGGGT GGCACCCATG GCATCGGCCA CACCCGCATG GCAACCGAAA GCGCCGTCAC CACGCTCGGC GCCCACCCCT TTTCCACCGG CGCCGACCAG TGCCTCGTCC ACAACGGCTC GCTGTCGAAC CACAACAATC TGCGCCGCGA ACTCATCCGT GAAGGCATGA GCTTCGAAAC CCAGAACGAC AGTGAAGTCG CCGCCGCCTA TCTCACGGCA GAAATGGCCA AGGGCAAGGA TCTCGGCCAG GCGCTGACCG GTGCGCTCGA CGACCTCGAC GGCTTCTTCA CCTTTGTCGT CGGCACCAAG TCGGGCTTCG GCGTCGTGCG TGACCCGATT GCCTGCAAGC CGGCGGTCAT GGCCGAGACC GACCAGTATG TTGCCTTCGG CTCCGAATAT CGCGCGCTGG TCAATCTCCC AGGGATCGAG ACCGCCCGTG TTTGGGAGCC GGAACCGGCA ACCGTCTACT TCTGGGATCA CGAAAAAGCC GCTTAA
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Protein sequence | MCGIVGLFLK DKRLEPQLGA LLSDMLITMT DRGPDSAGIA IYGGTADGKA KVTIQSADPA TDFAGLDADL VNAGIDAAVT VKSTHAVIEI AASRLGEIRA ILGEIRPNTR IMGSGESVEI FKEIGLPKDV VSRFDVRSMG GTHGIGHTRM ATESAVTTLG AHPFSTGADQ CLVHNGSLSN HNNLRRELIR EGMSFETQND SEVAAAYLTA EMAKGKDLGQ ALTGALDDLD GFFTFVVGTK SGFGVVRDPI ACKPAVMAET DQYVAFGSEY RALVNLPGIE TARVWEPEPA TVYFWDHEKA A
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