| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_6000 |
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| Symbol | |
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| ID | 5320302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 956458 |
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| End bp | 957981 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777676 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001314608 |
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| Protein GI | 150378013 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.234482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAAGG TAAGCATGGC GACACGTGCG GAATTGGTTG CGGCGATCAG TTGTCGCTAT
GTATTAGGTG GGCGGGCCGA GAAGGCGAGG ATGTTAGACG AGTTCGTGGC GCTCACGGGC
TTTCACCGCA AGCATGCGAT GCGACTGCTG CGAGGAGACC GCGAACCGGC GAAGGGTGGT
CCTCGGCCAG GGCGCCGGGT TTACGGCGAT GACGTGCGGG CAGCGCTCGT CGGTGTTTGG
GAGGCGTCGG ATCGAATTTG CGGCAAGCGA CTACACCCCC TGTTGCCAAC ACTGATCGAA
GCGATGGAAC GTCATGGACA CGGCGATATG AATTGCGAGA CGCGCCGGCA ACTCTTGGCG
ATGAGCCCAG CGACGATTGA TCGGGTCCTC AAGGAGATCA AAGCGAGCGC CACGGGTCCG
CGGCGCCGGA AAGGGTCAAC AGCGATACGG CGTAGTGTTC CCGTTCGAAC CTTCTCGGAT
TGGGATGACC CCGCACCCGG CTTTGTCGAG GCTGATCTCG TTTCTCATTC CGGCCCGTAC
GCGAGGGGTG CCTTCTCTCA AACGCTGGTG TTGACCGATA TAGCCACGGG CTGGACGGAA
TGCGCGCCGC TGCTGGTTCG CGAGCAAACG GTACTGATCA CTGCGTTGGC CGAACTGCGC
AAGTTGCTGC CGTTCCCGCT GCTGGGCTTC GACACCGACA ACGACAGTGT ATTCATGAAC
GAGAGTGTTC ATGAGTATTG CTTGCGCGAT AATATCGAGC TCACCCGTTG CCGCCCCTAC
CGAAAGAATG ATCAGGCATT TGTCGAGCAG AAGAATGGCG CGATCGTGCG CAAGATCGTT
GGATACCGAC GCTTCGAGGG GCTGCGAGCC ACTCGGGAAC TGGCCAAGCT TTATTCGTCA
ATGCGGTTGT TCGTGAATTT CTTTCAGCCA TCATTCAAGC TGAAAGAAAA GCACCGTGAC
GGAGCCAAGG TGGTCAAGCG CTATCATCGT CCCGCCACGC CCTATCAGCG GCTGCTTGAC
GACCCACGCA CGCCGGAGGA TACATGCCTT CGGCTCAAGG CGATGTACCT GACACTCGAT
CCGGTCCGGC TGCTCCGCGA CATACGCCTG GCACAAACGA GATTGGTCGA AATTGCTGAC
AAGCCTGATG GTTCGCCTGC CACCGACGGC GAGGCATTAC CGCTCGAAGA CTTTCTGTCT
GGCTTACGGA TTGCTTGGCG TGGTGGTGAA GTGAAACCGA CTGCCCGCTC CAAGCCAGCG
GCCAAGCGAG AGCGGCGGAG GCCCGATCCT CTACTCGCCG TCACTGCCGA ACTCGAGGAA
TGGTTCGAGG CGGAGCCTTG GCGAACTTCG CGAGAGTTGC TTGAACGCTT GCAGGTCAAA
TACCCCGGCG TGTATCCCGA CCGCCTCATT CGGACCGTGC AGCGTCGAAT GAAGATCTGG
CGCAGTACAC AGGCCAATGC GCTGGTGTTC GGGCCATTCG CCGATGTCGC GCGGCAGACG
CAAATCGTAG AGGTCGTGCA GTGA
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| Protein sequence | MRKVSMATRA ELVAAISCRY VLGGRAEKAR MLDEFVALTG FHRKHAMRLL RGDREPAKGG
PRPGRRVYGD DVRAALVGVW EASDRICGKR LHPLLPTLIE AMERHGHGDM NCETRRQLLA
MSPATIDRVL KEIKASATGP RRRKGSTAIR RSVPVRTFSD WDDPAPGFVE ADLVSHSGPY
ARGAFSQTLV LTDIATGWTE CAPLLVREQT VLITALAELR KLLPFPLLGF DTDNDSVFMN
ESVHEYCLRD NIELTRCRPY RKNDQAFVEQ KNGAIVRKIV GYRRFEGLRA TRELAKLYSS
MRLFVNFFQP SFKLKEKHRD GAKVVKRYHR PATPYQRLLD DPRTPEDTCL RLKAMYLTLD
PVRLLRDIRL AQTRLVEIAD KPDGSPATDG EALPLEDFLS GLRIAWRGGE VKPTARSKPA
AKRERRRPDP LLAVTAELEE WFEAEPWRTS RELLERLQVK YPGVYPDRLI RTVQRRMKIW
RSTQANALVF GPFADVARQT QIVEVVQ
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