Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5998 |
Symbol | |
ID | 5320300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | - |
Start bp | 955231 |
End bp | 955758 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640777674 |
Product | NUDIX hydrolase |
Protein accession | YP_001314606 |
Protein GI | 150378011 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.211306 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTGGGGGT TCTATAATCG GTTCTATGGC AAGGTCGTTT CTTTGATCAC GGTGCGCCCT AGCTACCTCG CGAGACTTGC GCCACATGCG AGCTCGCTAA TGAAAGGTGG CGCCGCCCAA CAGATCGGAG CAATCTGTTA CCGGACCAAC GAAATGGGCG CCGTAGAAGT CTTGTTGATC ACAACCCGCG ATTCCGGGCG GTGGACGATT CCGAAAGGTT GGCCCATTGA GAACCTGAAG CCACATCAGG CGGCAGAAAG AGAAGCATGG GAGGAGGCTG GCGTAGCCGG AAAAGCGAAG AAGCGAGCTC TGGGCTATTT CACCTATTTA AAAACTCTCG GCGACGGACA AACAACGCCA TCGGTCGTTG AGGTGTTCAG TCTGAAGGGA GACGAACTGC ACCTCGAGTT CCCGGAACGG GGAGAGAGGG AGGTGGCGTG GCTGTCTCCC GTCGAGGCCG CCAGGCGTGT GCAGGAGCCG GAACTGAAAG GATTGCTGAT GCGCATGCTC AAAGAACCGC TTCGATAG
|
Protein sequence | MWGFYNRFYG KVVSLITVRP SYLARLAPHA SSLMKGGAAQ QIGAICYRTN EMGAVEVLLI TTRDSGRWTI PKGWPIENLK PHQAAEREAW EEAGVAGKAK KRALGYFTYL KTLGDGQTTP SVVEVFSLKG DELHLEFPER GEREVAWLSP VEAARRVQEP ELKGLLMRML KEPLR
|
| |