Gene Smed_5998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5998 
Symbol 
ID5320300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp955231 
End bp955758 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content57% 
IMG OID640777674 
ProductNUDIX hydrolase 
Protein accessionYP_001314606 
Protein GI150378011 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.211306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGGGGT TCTATAATCG GTTCTATGGC AAGGTCGTTT CTTTGATCAC GGTGCGCCCT 
AGCTACCTCG CGAGACTTGC GCCACATGCG AGCTCGCTAA TGAAAGGTGG CGCCGCCCAA
CAGATCGGAG CAATCTGTTA CCGGACCAAC GAAATGGGCG CCGTAGAAGT CTTGTTGATC
ACAACCCGCG ATTCCGGGCG GTGGACGATT CCGAAAGGTT GGCCCATTGA GAACCTGAAG
CCACATCAGG CGGCAGAAAG AGAAGCATGG GAGGAGGCTG GCGTAGCCGG AAAAGCGAAG
AAGCGAGCTC TGGGCTATTT CACCTATTTA AAAACTCTCG GCGACGGACA AACAACGCCA
TCGGTCGTTG AGGTGTTCAG TCTGAAGGGA GACGAACTGC ACCTCGAGTT CCCGGAACGG
GGAGAGAGGG AGGTGGCGTG GCTGTCTCCC GTCGAGGCCG CCAGGCGTGT GCAGGAGCCG
GAACTGAAAG GATTGCTGAT GCGCATGCTC AAAGAACCGC TTCGATAG
 
Protein sequence
MWGFYNRFYG KVVSLITVRP SYLARLAPHA SSLMKGGAAQ QIGAICYRTN EMGAVEVLLI 
TTRDSGRWTI PKGWPIENLK PHQAAEREAW EEAGVAGKAK KRALGYFTYL KTLGDGQTTP
SVVEVFSLKG DELHLEFPER GEREVAWLSP VEAARRVQEP ELKGLLMRML KEPLR