| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5989 |
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| Symbol | |
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| ID | 5320291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 946380 |
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| End bp | 947318 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640777665 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001314597 |
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| Protein GI | 150378002 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.63499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.171061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGATAC ATCTGCATCG ACTGACGCCC GCCAAGGTCT GGTTGGGTGT CATCCCCACG
CTCTGGTGGA ATGACGATTT CATCAACATC GATATCGGCA TCCCCTACGA GCAGGCCCTG
AGTGAAATGG CGCTCGCCGG CTATGTCGGG TGTGGGGTCG GCCATAAATT TCCGACGGAT
CCGAAAATAC TGCGACCTGC CCTCGAACTC AGGGGATTGC GGATTTCGGA GCCTTGGGTG
AGCACTTACT TCACCATCAA GGCGATGAAG CGTCATACGC TGGACAACGT GGATGCTCAG
CTCGACTTCC TCGAAGCCAT GGAAGGTGGC AGCGACGATC CGCGCAGGGC CGATCTGGTC
GTCTCCGAGT TTGGCCGCGC TGTCAATCCG CTTCCGGTCG CCCTGTTTCC GAATTGCCCC
GATTTCTCCG AGGACGAGTG GAAATACCTG ATCGAAGGCT TGCATGAGGC GGGAGACAAA
GCCAGGGCCC GTAAGCGCCG GCTCTGCTAT CACCCGCATC TCGGAACCGG AGTGATGAAG
GCGGAAGCGA TCCACCGGCT CATGGATGAG ACGGAACCTG GCTTGGTCAA CATGCTTCTC
GATACGGCGC ACCAGGCGGC CGCCGGTGTC GATCCGCTGG CGCTGGCCAC TAAATACGCT
GACCGCATCA AACATGTTCA CTTGAAAGAC ATTCGCGCCG AGGTGGTCGA CGAGATTCAC
CACAGGGAAT TGTCCTTCCA GCAAGGCATC GAGGCAGGGA TCTTTACCGT CCCGGGTGAT
GGCTCCATCC AGACCTTTCC GGAGATTCTT GGTGCGTTGG CCGCGGCCAA TTTCGCCGGT
TGGATCTGCG TCGAAGCAGA GCAGGACCCG GCCAAGGCCA ATCCGCTGCA ATACGCGAAA
ATGGGCCGCG AATACCTGCG CGAGGTGCTC GGATGGTAG
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| Protein sequence | MVIHLHRLTP AKVWLGVIPT LWWNDDFINI DIGIPYEQAL SEMALAGYVG CGVGHKFPTD
PKILRPALEL RGLRISEPWV STYFTIKAMK RHTLDNVDAQ LDFLEAMEGG SDDPRRADLV
VSEFGRAVNP LPVALFPNCP DFSEDEWKYL IEGLHEAGDK ARARKRRLCY HPHLGTGVMK
AEAIHRLMDE TEPGLVNMLL DTAHQAAAGV DPLALATKYA DRIKHVHLKD IRAEVVDEIH
HRELSFQQGI EAGIFTVPGD GSIQTFPEIL GALAAANFAG WICVEAEQDP AKANPLQYAK
MGREYLREVL GW
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