| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5979 |
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| Symbol | |
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| ID | 5320281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 936308 |
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| End bp | 937546 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777657 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001314589 |
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| Protein GI | 150377994 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.448623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCTA ACCCGACCTC GATTCGTCAG CTGCTCGATC GCCGTCTATC GGGCTTCAGC
CTGGAGCAGC CCTTCTACGT CTCGCCCGAG GTCTACGCGC TCGACCTGGA GCACATTTTC
TACATGGAAT GGCTCTATGC CGTTCCGGCC TGCCAGCTCG CCAAGACGGG TAGCTATGTC
ACGCTGCGCG TAGGCGCTTA TGAGGTCGTC ATCGTCCGTG GCCGTGACGG TGAAGTCCGT
GCCTTTCACA ATTCCTGTCG CCACCGCGGA TCGTTGATCT GCAAGGCGCG CCAGGGGCAG
GTGGCGAAGC TTGTCTGTCC CTACCACCAA TGGACCTATG AGCTTGACGG TAAACTGATC
TGGGCGAACG ACATGGGTCC CGATTTCCAT GCTTCGAAAT ACGGCCTGAA ACCCGTCAAC
CTGCGCAGTC TCGACGGCCT CATCTATATC TGTCTTTCCG ATACGCCGCC GGATTTCCAA
ACATTCGCAC AGCTGGCGCG CCCCTATCTG GAGGTTCACG ACCTCAAGGA TGCCAAGGTC
GCGTTCACCT CTACGATCAT CGAGAAAGGC AACTGGAAGC TGGTCTGGGA GAACAACCGC
GAGTGCTATC ATTGCAGCAG CAACCATCCG GCTCTCTGCC GCTCCTTCCC ACTCGACCCG
GAAGTTGCCG GTGTTCAGGC CGATGGCGGA GTATCTGAGA AGCTGCAGGC GCATTTCGAC
CTTTGCGAAG CCGCCGGCAC ACCGGCGCAA TTCGTCCTTG CTGGCGACGG TCAGTATCGC
CTCGCACGTA TGCCGCTGCA GGAAAAGGCG TTGAGCTATA CGATGGACGG CAAGGCCGCG
GTTTCCCGGC ATCTGGGCCG GGTTGCCCCG CCGGATGCCG GCACGCTCCT GATGTTCCAC
TATCCGTCGA CGTGGAACCA CTTCCTGCCG GATCACTCAC TCACCTTCAG GGTTATGCCG
ATCAGCCCGA CCGAAACCGA GGTCACGACG ACCTGGCTCG TACACAAGGA TGCGGTCGAA
GGAGTCGACT ACGACCTCAA GCGCCTGACG GAGGTCTGGA TCGCCACCAA TGACGAAGAT
CGCGAGATCG TCGAAACGAA CCAGCAAGGG ATCCTCTCTC CGGCTTACGT GCCCGGTCCC
TATTCACCGG GTCAGGAAAG CGGCGTCATG CAGTTCGTCG ACTGGTATGC GGCCTGGCTG
GAGCGCGCCC TTGCGCCGCG TCAAGTGGCT GCGGAGTGA
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| Protein sequence | MTANPTSIRQ LLDRRLSGFS LEQPFYVSPE VYALDLEHIF YMEWLYAVPA CQLAKTGSYV
TLRVGAYEVV IVRGRDGEVR AFHNSCRHRG SLICKARQGQ VAKLVCPYHQ WTYELDGKLI
WANDMGPDFH ASKYGLKPVN LRSLDGLIYI CLSDTPPDFQ TFAQLARPYL EVHDLKDAKV
AFTSTIIEKG NWKLVWENNR ECYHCSSNHP ALCRSFPLDP EVAGVQADGG VSEKLQAHFD
LCEAAGTPAQ FVLAGDGQYR LARMPLQEKA LSYTMDGKAA VSRHLGRVAP PDAGTLLMFH
YPSTWNHFLP DHSLTFRVMP ISPTETEVTT TWLVHKDAVE GVDYDLKRLT EVWIATNDED
REIVETNQQG ILSPAYVPGP YSPGQESGVM QFVDWYAAWL ERALAPRQVA AE
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