| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5971 |
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| Symbol | |
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| ID | 5320273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 929726 |
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| End bp | 931201 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640777652 |
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| Product | hypothetical protein |
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| Protein accession | YP_001314584 |
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| Protein GI | 150377989 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5361] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.346043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCA CTCGGAGGGA TGCGTTCAAA ATGGCTTCGT CTGCTGCAAT TCTTGGAGCT
AGCGCGGCGG CAGCACACGA TGCTGCCGCC AAAGCCGTCC CGCAGGGTGT CGATCTGGAG
TTCGACCTCG GAATTCCTAC GCAAGATACG GTCGAGAAGC TTTACGACAC GATGGATTTT
CAACGCGCAG TGCAGGGCTA TCTCTGGGCG GTTCCGATCG TCGGAATGGA AGGTGCGCGC
CGGATGCTTG TCGACAACGC CGAAGCCAGG AGCGGCGATC TTGTGCTTGT TGCCGGGTAT
AGGGACGTCA GTGCCATGCT CGGGTCGAAT GTGACGACGC CCTATGTGTT CGCGTGGTTT
GATCTTACAG AAGGACCGAT TGTCATCGAA TATCCCGAAG GCGCCACGGC CGGCTCCCTG
ATCGACTGGT GGGATCGTCC GCTCATTGAT GTCGGCGTTT CGGGCCCAGA TGGCGGCAAG
GGAGCGAAAT TCGTAGTGGT TGGTCCGGCG CATGAAGCGC CGGAAAATTC CCCGGCTGGC
GCAAAACTGC TGCGTTCCCG CACCAACAAA GTCCTGTTGT TCTGCCGGGG ACTCGATGGT
GACCTCAAGA CGGTCGAGGC TGTTTTCTCT AACACTCAGG TCTATCCGCT TGGCGCTACA
GGGAGTGGAG TGGCCGCGTT TCTTAGATTC AAGACGGAGG GCGAGTTGAC CAGCATGGCT
CATCCTAAGG GCCTCGCATA CTGGCAGTCG TTGATTCAGG CGCTGGATGG TGAGCAGATC
GAGGATCGAG ACCGCTTCTT TGCCGCTATG TTGAAGCCGC TCGGCGTCAC CTATGGCGGA
TCGTTCTCGC CAAACGACCG GCAGACGGGG TTACTTCACA ACGCCGCAAT CCTCGGCGAA
GCGATGGCGA AGGCCAGTGC TTTCAGCAAG CGCATTCCAG GGATGCGCTA TAGGGACGAT
ACGCACTGGG AATATTTGAT CCCTCAGGAC TTTGTCAACG AACAGGACGG ACCGGATGGT
ACTCTGCTCG ATCAACGGAC GGCCTTCTTC TACGAGGTCA CAGGCACTTC CGCCGCCGTT
CTCACCAAGA CACCCGGAAC TGGCTCGGCA TACCTCACCG CCTACAGTGA TCCTGACGGA
CACGCTTTCG ACGGCGCAAA GTCTTACCGG TTGCGCGTTC CAGCCAATGT ACCCGCCAAG
ACCTTTTGGT CGATCACGCT CTACGACACC GAGACGCGCG GTCTCATTCA GAACAAGCAA
CAGATCGTGG ATCGGTCCTC ACGGCAAAAT CTCAAGGTCC AAAACGACGG CTCGATTGAG
ATCGTTATGG GACCGCAGAC TCCGGATGGC CTGGAGCAGA ACTGGATACC GACAACGCCA
GGTAAGGCTT GGTTTGTGTA TTTCCGCTTG TTCGGTCCGC TAGAGCCATA TTTCGACAAG
TCGTGGCGCT TGCCTGACAT TGAGAAGGCC ATATAA
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| Protein sequence | MEITRRDAFK MASSAAILGA SAAAAHDAAA KAVPQGVDLE FDLGIPTQDT VEKLYDTMDF
QRAVQGYLWA VPIVGMEGAR RMLVDNAEAR SGDLVLVAGY RDVSAMLGSN VTTPYVFAWF
DLTEGPIVIE YPEGATAGSL IDWWDRPLID VGVSGPDGGK GAKFVVVGPA HEAPENSPAG
AKLLRSRTNK VLLFCRGLDG DLKTVEAVFS NTQVYPLGAT GSGVAAFLRF KTEGELTSMA
HPKGLAYWQS LIQALDGEQI EDRDRFFAAM LKPLGVTYGG SFSPNDRQTG LLHNAAILGE
AMAKASAFSK RIPGMRYRDD THWEYLIPQD FVNEQDGPDG TLLDQRTAFF YEVTGTSAAV
LTKTPGTGSA YLTAYSDPDG HAFDGAKSYR LRVPANVPAK TFWSITLYDT ETRGLIQNKQ
QIVDRSSRQN LKVQNDGSIE IVMGPQTPDG LEQNWIPTTP GKAWFVYFRL FGPLEPYFDK
SWRLPDIEKA I
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