| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5956 |
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| Symbol | |
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| ID | 5320258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 919639 |
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| End bp | 921036 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640777642 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001314574 |
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| Protein GI | 150377979 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.630821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.232686 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACG AGCTTCTGAT CATCGAGGAC GACGCCATGC TCGGCATCGA TCTCAAGCGG
CATTTCGAAC GCGTAGGCTG GAGGACGCGC CTCGTCCGCA GCCTCGGGGA GGCTGGCTCT
TTCGTGTTCG GGCCTGGCTA CGAAGGGCTC GTCGTGCTGT CGGATCTGCA TTTGCCCGAC
GGCAATTCAC TCGACCTCCT CGAACGCGCC CGTGGCGAGG GCGACAGCCG CGAATGGATC
TTTCTCACCG GATTCGGGGA GGCACCGGAT GCGGAGCGAG CCAAGCGTCT TGGTGCCTTC
GATTTTTTGA CCAAGCCGAT GGACCGCGAG CGCCTCGAGC GCATCGTTAC CGCGGCGCGA
CGCGGCGCGC GCGCCCAGAG GCGGATCGCC GACGAAGCCT CGCAGCAACG CAACCGCTAC
AGCCCGGCCG CCTTTGTCGG CCGTAGCAAG GATGCCGAAC GCGTACGCGA TACGCTTGAA
AGGCTGTGCC AAATCCCGCT CAGCAGTGTC ATCATCTCGG GAGAGACTGG CAGCGGCAAA
GGCCTTGCCG CGCGCATTCT GCACCACAGC GGCACGCGCG CCAACGGCCC CCTGGTCGAG
GTAAACTGCG CAGCCTTGCC GCGCGACTTG GTAGAGTCCG AGCTTTTCGG CCACGAGGCC
GGTGCCTTTA CCGGAGCAAA GAGCAACCAT CGCGGCTTCA TGGAACAGGC GACCGAGGGC
ACGCTCTTTC TTGACGAAAT CGGCGAACTC GATCTCGATC TTCAGGCAAA GCTCCTCAAG
GTGCTCGAGG ACAAGGCGAT CCGCCGGGTC GGCGGCGAGC GGATGGTACC GGTCGACGTG
CATGTGGTGG TAGCGAGCAA TCGAAACTTA CGGGAACTCG TCGCCGAGAA GGCGTTTCGG
GCAGATCTCT ATCATCGCCT CAGCGTTTTC CAACTCGATC TCCCGCCGTT ACGGGCCCGC
AAGGCGGATA TCGACGAGAT CGTCGCCGGT CTCATCCCGG AGTTCAACGC TATCGCCGGC
AAGCGGGTTA AACGCGTTCC CCAAGCCGTG CGGGCGCTCC TTGCCGCCTA CGACTGGCCG
GGAAATGTGC GCGAACTTCG CAACGTCGTC GAGCGGTCGG TGCTTCTCTC CACCGGTGAA
GAGCTGCCGG CCGAATGGCT GCAAATCGCG CCCGACGGTG CGCCGGCGAC GATGACCGCT
GCAGGCGACC TCATCTTCCT TCCCTTGGAC GGTTCGATGA ACTTCGACAC GATGGAGAAG
CTGATCGTCG AGGCGGCCCT GCAGCGTGAC GGCTACAATG TCATGGCAGC GGCGCGAAGG
CTTGGTCTCA CGCGCGAAAC CCTGCGCTAC CGCATGGCCC GCCACGACCT GCAGGGGCAG
AACGCGCCGC AACGGTGA
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| Protein sequence | MSDELLIIED DAMLGIDLKR HFERVGWRTR LVRSLGEAGS FVFGPGYEGL VVLSDLHLPD
GNSLDLLERA RGEGDSREWI FLTGFGEAPD AERAKRLGAF DFLTKPMDRE RLERIVTAAR
RGARAQRRIA DEASQQRNRY SPAAFVGRSK DAERVRDTLE RLCQIPLSSV IISGETGSGK
GLAARILHHS GTRANGPLVE VNCAALPRDL VESELFGHEA GAFTGAKSNH RGFMEQATEG
TLFLDEIGEL DLDLQAKLLK VLEDKAIRRV GGERMVPVDV HVVVASNRNL RELVAEKAFR
ADLYHRLSVF QLDLPPLRAR KADIDEIVAG LIPEFNAIAG KRVKRVPQAV RALLAAYDWP
GNVRELRNVV ERSVLLSTGE ELPAEWLQIA PDGAPATMTA AGDLIFLPLD GSMNFDTMEK
LIVEAALQRD GYNVMAAARR LGLTRETLRY RMARHDLQGQ NAPQR
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