| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5954 |
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| Symbol | |
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| ID | 5320256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 916362 |
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| End bp | 917861 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777641 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001314573 |
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| Protein GI | 150377978 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0760832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATCGA GATTTTCTTC TTCCCTCGCC GCCAGTCAGC CCGCTCTTCT CGCGCTCGGC
TTTGCGATTC TGGCAATGAT CAGCGGAACA TCCGTGTGGC TGGTCGCCCA GACGCGCGGT
GACTCGAAGC AGGTGATGTG GACGCTCACC GCCAAGGAAA AACTCCTTGA TTTACAGGGT
CAGGTCTGGC GGGCCGAGAG CGATCAGCGC GGGTTGCTAC TTACCGGAGC AGGACGCTAC
CGGGACGCAT TTCTTGCCGA CATAGAGGCT GTCAAAAATG CACTGGCTGA AGCCAAGGCG
GCCTTGTCCA GTGATGTCGG GAAGGAAAGC CGCCAGCCGC TTGTCGCCAG GCTTGAGGCG
GCCGTAACGG CAGAACTCGC TCTTCTCGAA GACACCGCTG CCAAAGGGCA AAACGGCGAG
CTCGACCGTT CCCCCGCCCT TGGAAATGAT GCGTTGGTGC AGTCACGTGC CGAGGACATT
AGGATAAATA TCGCGCAACT TGTCAGGCAC GAGCAACAGT TGCTGTCAGA AGCAATCGGC
GCTTCGCAAA GCACCGCGCA CTTGCTCCTG ATCGCCAGCC TTTTCGGGGC ATCACTGATA
ATCGCTCTGG CGACCACGTC GGTTGCCTTG GTGCGTCACT CGACCAGCCG GCTGAAGATC
GCCCAGAGAG CGCTTGAAGA GGCAAACGAG TCCTTGGAGG CAACGGTCGC GAAACGCACT
GCCGAACTGA GGGAAGCCAA CGAGGAGATC CAGCACTTCG CCCATATCGT CAGCCACGAT
CTGCGCTCGC CGCTCGTCAA CATCATGGGC TTTACCGGTG AACTGGAGGT GCTGCGAAAG
GAGCTCTTCG GACGCATCTC CTTGCTCAGA GCGCGGCATG AGGTTGACCC TGAGCCGGAC
GAGCGGCTTG CGGAGGAATT TGATGAAGCG CTTAACTTTA TCAAGAACTC GATCACGCGC
ATGGATCGGC TGATCAAAGC CATTCTCAAA CTCACCCGCG AAGGCCGCCG CGAGCTCCGC
CTGGAACTGA TCAATATGAC CGAGCTGGCC CAAACGGCGG CGGACGGATT CAGCTACCAG
TCCCACGAGG CCGGGGCTCT GATCATCATC GATTCCCTGC CGTCCTGCGT CGGCGACCGC
CTTGCTCTCG AGCAGATCTT CGCCAATCTG CTTGAGAACG CTCTAAAGTA CCTGCGCGAC
GGCATTCCCG GCCAGATTCA GGTGACTGGT CGCACGACGG CTTCCGAGGT CGTATATGAG
GTGAATGACA ACGGACGAGG CATCGATCCT ATGGATCGCG AACGCATTTT CGAGATATTC
CGCCGTTCAG GCCCTCAGGA CCGCCCGGGG GAAGGCATTG GCCTCACTTA TGTACGAACT
CTTGTCCGCC GCCTCGGCGG CGCCATTACA GTCCGCTCCG GTCCCGGCGG CGGCAGCACC
TTCACCGTGA CACTGCCGCG TCGCACGGCG AGCGCCTTAC AGGAGAAAAC CCATGACTAG
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| Protein sequence | MISRFSSSLA ASQPALLALG FAILAMISGT SVWLVAQTRG DSKQVMWTLT AKEKLLDLQG
QVWRAESDQR GLLLTGAGRY RDAFLADIEA VKNALAEAKA ALSSDVGKES RQPLVARLEA
AVTAELALLE DTAAKGQNGE LDRSPALGND ALVQSRAEDI RINIAQLVRH EQQLLSEAIG
ASQSTAHLLL IASLFGASLI IALATTSVAL VRHSTSRLKI AQRALEEANE SLEATVAKRT
AELREANEEI QHFAHIVSHD LRSPLVNIMG FTGELEVLRK ELFGRISLLR ARHEVDPEPD
ERLAEEFDEA LNFIKNSITR MDRLIKAILK LTREGRRELR LELINMTELA QTAADGFSYQ
SHEAGALIII DSLPSCVGDR LALEQIFANL LENALKYLRD GIPGQIQVTG RTTASEVVYE
VNDNGRGIDP MDRERIFEIF RRSGPQDRPG EGIGLTYVRT LVRRLGGAIT VRSGPGGGST
FTVTLPRRTA SALQEKTHD
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