| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5952 |
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| Symbol | |
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| ID | 5320254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 914865 |
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| End bp | 915932 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640777639 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_001314571 |
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| Protein GI | 150377976 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.113414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTGG GCAGGGTGCT CTACATTGAC GACGATCCAG CCCTTCGGCG TCTGGTCGGT
AAGGAGTTCG AGCGGCACGG CTACATTGTC CAGCTTGCTG CCACAGGCGA CGAGGGGCTT
CGCCACTTGC GCGCGGGCGG CATCGATGTT GTGGCACTCG ACCACTACAT GCCCGGCCAG
GATGGGCTCC AGACACTCGC TTCCATCCGC GCCGATCCTG ATCCGCCGCC GGTGGTCTAT
GTGACCGGCT CGGAGGAGGG TCGGGTTGCG ATCGCAGCAC TGAAGGCAGG CGCGACAGAC
TATGTCCTCA AGGATGTTGG TGGCGAGTTT CTCGCGCTGT TGCGGGTGGC GATTGAAGGC
GCCCTTGCTC AGGCGGACCT GCGGCGCGAA AAGGAGGAGG CGGAAGCCGA AGTGCGAGCC
GCGCGTGACC GGTTCGAGGC GCTCGCGGCT GAAAGAGCCG TGCTGCTTCG CGAAGTGAAC
CACCGGGTCG GTAACAGCCT GCAGCTCGTC TCTACCTTCC TCCTGATGCA AAGCGACATG
AGCGATGAGC CCCATGTAAA GGCGGCGCTC GCCTCTGCCT ATGGCCGTGT GCTTGCCATC
GCCCAGGTGC ACAAGCGCCT CTATACGTCA GACGATGTGC GCACAGTCGC GCTCGACAAC
TATCTCCATG CGCTCGTCGT AGACATTGGC GCCTCCGCGG CCGGCGCGAA CGGGTGGCTC
TCTCTCGCGG CCGATCCGGT CGCGATAGAC CCAGACCGTG CCGTGGCAGT CGGCGTTATT
GTCACCGAAT TGATCATCAA TGCGATGAAA CACGCATACC CCCGCGGGGA GGGGCCCGTT
CGTGTTGCGC TACATGCGCC GGCAGGAAAT AGCGTTTGCC TGTGCGTGGA GGATGATGGA
CTGGGGAGCC GATTGCCGCC CGCAGAAGGC TCGACGGGGC TTGGGCAGCT CATCATCGAG
GCCATGGCGG TGAAGCTCGG AGCGGTTGTG ACCGTCCACG CACGCGACCC CGGGACGCGG
GTCGTTGTCG ATTTCATGAA AGCCGAGGCC AAACGACTGG TGGATTAG
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| Protein sequence | MALGRVLYID DDPALRRLVG KEFERHGYIV QLAATGDEGL RHLRAGGIDV VALDHYMPGQ
DGLQTLASIR ADPDPPPVVY VTGSEEGRVA IAALKAGATD YVLKDVGGEF LALLRVAIEG
ALAQADLRRE KEEAEAEVRA ARDRFEALAA ERAVLLREVN HRVGNSLQLV STFLLMQSDM
SDEPHVKAAL ASAYGRVLAI AQVHKRLYTS DDVRTVALDN YLHALVVDIG ASAAGANGWL
SLAADPVAID PDRAVAVGVI VTELIINAMK HAYPRGEGPV RVALHAPAGN SVCLCVEDDG
LGSRLPPAEG STGLGQLIIE AMAVKLGAVV TVHARDPGTR VVVDFMKAEA KRLVD
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