Gene Smed_5946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5946 
Symbol 
ID5320248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp907235 
End bp907579 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content61% 
IMG OID640777635 
Producthypothetical protein 
Protein accessionYP_001314567 
Protein GI150377972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0980927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGCCC TACCGCATGG AAAGCCTCTT GCCGTGGGCA AGGCGGAACG CGAGGCCCAT 
TGCAGATCGG GAGCGACGGG CGGCATGACA CGAAACAGCC AAGGGACGAC GACACGACCG
AAGCTCGATG ATGAGGCGTT CGAAGCCTTC ATCAGGGCAC GTCGTCCTGT GTCGCCGATC
TGCTCGATGA GCGGTCTCGA TGGTTATCTC ACGGCTCTCA TCATCGGCCC GAAGTTTATC
GACCCACGTC AGTGGATCCC GGAGCTGGCT GGCCCAGAGG CCCTGAACCT GCCGATGGAA
ACAACCGAAC ATCGGGCCGT GGCAGACCAT CGTTGCGGAA TATAA
 
Protein sequence
MKALPHGKPL AVGKAEREAH CRSGATGGMT RNSQGTTTRP KLDDEAFEAF IRARRPVSPI 
CSMSGLDGYL TALIIGPKFI DPRQWIPELA GPEALNLPME TTEHRAVADH RCGI