| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5939 |
|---|
| Symbol | |
|---|
| ID | 5320241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009621 |
|---|
| Strand | + |
|---|
| Start bp | 901806 |
|---|
| End bp | 902605 |
|---|
| Gene Length | 800 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640777631 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001314563 |
|---|
| Protein GI | 150377968 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3293] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.754111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0437323 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAGGTG AAGTTCTTCG TGACGATCAG TGGGAGCACA TCAGACCGTT CGTGCCGGGC
GGGCGCAAGG GCAAGCGCGG CCCGCGCAGC GATGGCCGGC GCTTCGTCGA CGCGCTGTTA
TGGATGGCGC GCTCGGGTGC GCGCTGGCGC GACCTGCCGG AACGGTTCGG TCCCCACCAG
ACGGCAAAGC GGCGTTATTA CCGCTGGATT GAGGCGGGCG TGTTCGACCG ACTGTTCGAA
GCGGTCGCCG GCGATCCAGA CCTGGAATGG ATGATGCTTG ATGCGACCGT CATTCGCGCG
CAAGCGCAAG CGGCCGGGGC ACGGCGCAAA AGGGGGGACC TGAAGCCCAG GCTCTCGGTC
GCTCCCGCGG CGGCTTCGGC ACCAAGCTCC ACGCCGTCGT AGACGCGCTC GGCCTGCCGG
TCCGTTTCGA GGTCGGGCCC GGTCAGCAGA ACGACATGGC GCCAGCTTGT GATCTGGTCG
AGGGCCTGCC GGCCGCCCAA GTGATAGCCG ATCGCGCCTA CGACGCCGAT CGCTTGCACG
ACATCATCCT CGATCAAGGC GGTGAACCCG TCATCCCGCC GCGTCGCCAT CGCAAATACC
AGCACGGCTA CGACAAGGTC GCTTACAAAA ACCGCTGGCG CATCGAGGGC TTCTTCGCCA
AGCTCAAGCA ATGGCGGCGC ATCGCCACCC GCTACGACAA ACTCGCCGCC CACTTCCTCG
GCTTTGTCAA ACTCGCAAGC ATCATGCTCT GGCTTAAATC ATTAAATTGT CACTACAGCC
TAGGCTGTTT GAATCAGTAG
|
|---|
| Protein sequence | MEGEVLRDDQ WEHIRPFVPG GRKGKRGPRS DGRRFVDALL WMARSGARWR DLPERFGPHQ
TAKRRYYRWI EAGVFDRLFE AVAGDPDLEW MMLDATVIRA QAQAAGARRK KGGPEAQALG
RSRGGFGTKL HAVVDALGLP VRFEVGPGQQ NDMAPACDLV EGLPAAQVIA DRAYDADRLH
DIILDQGGEP VIPPRRHRKY QHGYDKVAYK NRWRIEGFFA KLKQWRRIAT RYDKLAAHFL
GFVKLASIML WLKSLNCHYS LGCLNQ
|
|---|
| |