| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5935 |
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| Symbol | |
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| ID | 5320237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 897729 |
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| End bp | 899348 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777628 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_001314560 |
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| Protein GI | 150377965 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.137652 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGA CAGTCGAGAT GGTCGTACTT GCCGTCGGCG CCTTCCTGGC GCTGGTCGGA
GCCGGTCTCG CCCAGGACCG CCTGTTCGGC GCGCACATGT GGATACTGTT CTTCGTGCTG
CTCGGCGGCA CATTGGTGCT CATGCGCCGC GTTGATTTCC GTGCGGCTTC CGCGGGTCGC
CGGGCCGGAG AGACGGAATA TTTCGACGAG GTCGTGAAGT ACGGCGTCAT CGCCACGGTA
TTCTGGGGTG TGGTCGGTTT TCTCGTAGGC GTCGTCGTTG CCCTGCAACT TGCCTTCCCC
GACCTCAATG TGGAGCCCTG GTTCAGCTTC GGCCGCATGC GGCCGCTCCA CACCTCGGCC
GTGATCTTCG CGTTTGGCGG CAACGCATTG ATCGCGACGT CCTTCTATGT GGTTCAGCGC
ACGAGTCGAG CGCGCCTCTT CGGCGGTGAT CTCGGCTGGT TCGTTTTCTG GGGTTATCAG
CTTTTCATCG TGCTTGCAGC GACCGGCTAC CTGCTCGGAA TTACCCAGAG CCGCGAATAC
GCGGAGCCGG AATGGTACGT CGATCTTTGG CTGACAATCG TATGGGTCGC TTATCTGGCC
GTCTTCCTCG GCACGATCTT GAAGCGCAAA GAACCGCACA TCTACGTGGC GAACTGGTTC
TATCTCGCCT TCATCGTCAC CATCGCGATG CTGCACATCG TCAACAACCT GGCGGTGCCG
GTATCGTTCC TGGGTTCCAA GAGCTATTCG GCCTTCGCCG GCGTCCAGGA CGCGCTGACG
CAATGGTGGT ACGGCCATAA CGCGGTCGGC TTCTTCCTGA CCGCCGGCTT TCTGGCAATG
ATGTACTACT TCATCCCGAA ACAGGTAAAT CGCCCCGTCT ATTCCTACCG GCTGTCGATC
ATCCACTTCT GGGCGCTGAT CTTCATGTAC ATCTGGGCAG GTCCCCACCA CCTGCACTAC
ACGGCGCTGC CCGACTGGGC TCAGACGCTC GGCATGGTCT TCTCCATCAT GCTCTGGATG
CCCTCCTGGG GCGGCATGAT CAACGGCTTG ATGACGCTCT CCGGTGCCTG GGACAAGATC
CGTACGGATC CGGTCGTCCG CATGATGGTC ATGGCCGTCG CCTTCTACGG CATGGCGACC
TTCGAGGGGC CGATGATGTC GATCAAGTCC GTCAATTCGC TGAGCCACTA TACCGACTGG
ACCATCGGTC ACGTCCATTC CGGCGCGCTC GGATGGAACG GCCTCATCAC CTTCGGTGCC
GTTTACTATC TGGTCCCGAA GCTCTGGAAC CGGGAGCGTC TTTACAGCCT GCAAATGGTC
AATTGGCACT TTTGGCTCGC CACCCTCGGC ATCGTCGTCT ATGCCGCCAC AATGTGGGTA
GCGGGCATCC AGCAGGGGCT GATGTGGCGC GAATACGATG ATCAGGGTTT CCTCGTCTAC
TCCTTCGCGG AGTCGGTGGC GGCGATGTTC CCGTACTACG TCATGCGTGC CGCGGGCGGT
GCCCTGTTCC TCGCCGGCGC GCTCGTAATG GCCTTCAACG TAACAATGAC CATCCTCGGC
CGCATGCGCG ATGAGGCCGC GGCCATGGAT GCCGCGCCGC TGCCGGCACC GGCAGAATAG
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| Protein sequence | MKQTVEMVVL AVGAFLALVG AGLAQDRLFG AHMWILFFVL LGGTLVLMRR VDFRAASAGR
RAGETEYFDE VVKYGVIATV FWGVVGFLVG VVVALQLAFP DLNVEPWFSF GRMRPLHTSA
VIFAFGGNAL IATSFYVVQR TSRARLFGGD LGWFVFWGYQ LFIVLAATGY LLGITQSREY
AEPEWYVDLW LTIVWVAYLA VFLGTILKRK EPHIYVANWF YLAFIVTIAM LHIVNNLAVP
VSFLGSKSYS AFAGVQDALT QWWYGHNAVG FFLTAGFLAM MYYFIPKQVN RPVYSYRLSI
IHFWALIFMY IWAGPHHLHY TALPDWAQTL GMVFSIMLWM PSWGGMINGL MTLSGAWDKI
RTDPVVRMMV MAVAFYGMAT FEGPMMSIKS VNSLSHYTDW TIGHVHSGAL GWNGLITFGA
VYYLVPKLWN RERLYSLQMV NWHFWLATLG IVVYAATMWV AGIQQGLMWR EYDDQGFLVY
SFAESVAAMF PYYVMRAAGG ALFLAGALVM AFNVTMTILG RMRDEAAAMD AAPLPAPAE
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