| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5926 |
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| Symbol | |
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| ID | 5320228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 888408 |
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| End bp | 890081 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777619 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_001314551 |
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| Protein GI | 150377956 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.657948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGGGA GCGGCTTCAT GGGACAGTTG ACGACCCGCG AACGGGATCT GGCCGCGGCA
ATATTGCTCG TCCTGGCTAT TGTCGGCATT GCCATGGCGG CAGCAGGCCG GTTCGATCCG
ATCGGGGTAC ATGGGGCTAT CGTCCTCTTA TACAGCCTCG GCCTGCTGTA TCTCATCATG
TCCAGCTCTT TCGGACCTCC TCCGGACCCG TCGCGAATCT CGCGCTATTA CGACGATCCC
ATCAAGGTCG GCGTCTGGTT TACGCTGTTG TGGGCGATCT TCGGCATGTT CATCGGCGTC
TGGGCGGCGG CGCAGCTTGC CTGGCCTAGC CTCAATTTCG ACACCGCCTG GGCGAGCTTC
GGGCGGATCA GGCCCGCCCA CACGACCGGG GTCATTTTTG GGTTCGGCGG CAACGCCCTG
ATCACAACCT CGTTCCATGT GGTTCAAAGG ACCTCGCGCG CCCGGCTGGC GGATCAACTC
AGCCCGTGGT TCGTTCTGTT CGGCTACAAT CTATTCTGCA TCGTGGCCGT GACCGGCTAT
TTCATGGGCG TGACGCAATC GAAGGAATAT GCGGAGGCGG AATGGTATGC CGACCTCTGG
CTCGTTATCG TCTGGGTCAC CTATTTCGTC CTTTACATCC GTACGCTGGC GCGCCGCAGG
GAGCCTCACA TTTACGTCGC CAACTGGTAC TACTTGGCCT TCATCGTGGT CGTGGCGATC
CTACACATCA TCAACAATCT TACGGTTCCG GTCTCCCTCG GCCATGCCAA GAGCTACACG
ATCTGGCCGG GCGTGCAGGA CTCGATGGTG CAGTGGTGGT ACGGGCACAA TGCGGTCGCC
TTCTTCCTGA CGGCAGGCTT CCTGGCGATG CTCTACTATT ACCTGCCGAA ACGAGCCGAG
CGGCCCATCT TTTCCTACCG GCTTTCGATC CTCAGCTTCT GGGGCATAAC CTTTTTCTAC
ATGTGGGCCG GCTCCCACCA CCTTCACTAC ACGGCCCTGC CGCACTGGGT ACAGAACCTC
GGAATGACGT TCTCGGTAAT GCTGCTGGTT CCCTCATGGG CATCGGCCGG CAACGCCCTG
CTGACGCTGA ACGGCGCATG GCACAAGGTT CGTGACGACG CGACGCTGCG CTTCATCATG
ATGGCCGCCT TCTTCTACGG CCTCTCGACC TTCGAGGGCT CGTTTCTCGC GGTTCGTCCC
GTCAATTCGC TGTCGCACTA CACCGACTGG ACTGTCGGCC ATGTCCATGC GGGGGCCCTG
GGCTGGGTGG CGTTGATCAC CTACGGGTCG CTCTACACGC TCGTGCCGGC GATCTGGAAG
CGCGAGAGGA TGTATTCGGC GGCCCTCGTC GAGGTCCATT TCTGGCTCGC CTTCGCCGGC
ACCGTCATCT ACGTCTTCGC AATGTGGAAC TCGGGCATCA TCCAAGGTCT GATGTGGCGG
ACCTATACCG GGGAGGGGAC GCTCGCCTAT TCCTTCGTGG ACTCACTCGT GGCGATGTAC
CCCTACTATA TCGCCCGCGC CTTTGGCGGC CTGCTGTTCC TGATCGGAGC CGTCGTCGCC
ACCTACAACA TCTGGATGAC CGTTCGCGGC GTCCCCGCTC TGGCCGAGCG GCACGAGGAT
GTTCCGGTTG CCGCGCATCT AGCGGACGGC GCGGCAACGG GACCGGCGGA GTAG
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| Protein sequence | MRGSGFMGQL TTRERDLAAA ILLVLAIVGI AMAAAGRFDP IGVHGAIVLL YSLGLLYLIM
SSSFGPPPDP SRISRYYDDP IKVGVWFTLL WAIFGMFIGV WAAAQLAWPS LNFDTAWASF
GRIRPAHTTG VIFGFGGNAL ITTSFHVVQR TSRARLADQL SPWFVLFGYN LFCIVAVTGY
FMGVTQSKEY AEAEWYADLW LVIVWVTYFV LYIRTLARRR EPHIYVANWY YLAFIVVVAI
LHIINNLTVP VSLGHAKSYT IWPGVQDSMV QWWYGHNAVA FFLTAGFLAM LYYYLPKRAE
RPIFSYRLSI LSFWGITFFY MWAGSHHLHY TALPHWVQNL GMTFSVMLLV PSWASAGNAL
LTLNGAWHKV RDDATLRFIM MAAFFYGLST FEGSFLAVRP VNSLSHYTDW TVGHVHAGAL
GWVALITYGS LYTLVPAIWK RERMYSAALV EVHFWLAFAG TVIYVFAMWN SGIIQGLMWR
TYTGEGTLAY SFVDSLVAMY PYYIARAFGG LLFLIGAVVA TYNIWMTVRG VPALAERHED
VPVAAHLADG AATGPAE
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