Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5908 |
Symbol | |
ID | 5320210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 873654 |
End bp | 874700 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640777603 |
Product | malate/L-lactate dehydrogenase |
Protein accession | YP_001314535 |
Protein GI | 150377940 |
COG category | [C] Energy production and conversion |
COG ID | [COG2055] Malate/L-lactate dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.767932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.259263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGATC ATGTCATCCT TGAGGCTGAA GCGCTGCGAG GCTTCACCGA AGACGTCCTC AAAGCTGCCG GTATGCGCCC GCAACCGGCG GCAACCGTCG CCGATACGCT TGTTTACGCC GATCTGCGCG GCGTTTCTTC TCATGGCGTC GCGCGGCTGG GTTCCTATCT GGATCGTATC CGTGCCGGCG TCATGGAGAT CGATCCGCAG ATGAGGCTCA TCCGCGAAGC GCCGGCAAGC GGCCTGCTCG ACGCAGGCAA CGGCTTCGGC CAGATCGCCG GCATGACGGC AATGGAGATT GCGATCGAGA AGGCAAAATC CGCAGGCAGC GCGGTGATCG GCATTGCCAA TTCCAATCAT TTCGGCGTTG CCGCCTATTT TGCCGAACGG GCGACGCGCG CCGGCATGGT GGGGATCGTG TTGACGAACT CCTCCCCCGC CATGACGGCC TTCAATACCC GCATTCCGCT GATCGGCACC AATCCGATCG CCTTCGGAAT CCCCGCCGGC GCCGAGCGGC CGATCATACT GGACATGTCG ACCTCGTTGG TCGCTCGCGG CAAGATCCGC CTCGCCTCGC TCACCGGCAA GCCGATCCCT CTGGGCTGGG CCTATGACGA TCGGGGGCTT TCGACCGAAG ACGCGCATGC CGCGCTGAAG GGCAGCCTTG CTCCTATCGG AGGACCGAAG GGGGCCGGCC TGTCGCTGAT CATCGATCTT CTGACCGGCG TCCTGACCGG TACGGGGCTG ACCGGCGAGG TGAAGAATAT CACCGACATT TCCGGCCCCT CCCGCACCGG ACATCTGATG ATCGCTTTCG ACGTCAGCCG ATTCATTTCG CCGGAACTCT TCAAGTCGAG TGTCGACAGC GTAGTCGCCA ACATCAAGGC AATGCCGTCG GCCGACGGCG GTCCGGTCTT TATGCCGGGA GAAATGGAGG CCATAGGGGC CGAAAGACGT GCTCGGGACG GCATCGGTGT TCCGCGTGAC ATCGTCGATA CGCTTCGGGG GCTCTCCGTC ACCTATCTCG GAGAGCTCAG ACTGTAG
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Protein sequence | MSDHVILEAE ALRGFTEDVL KAAGMRPQPA ATVADTLVYA DLRGVSSHGV ARLGSYLDRI RAGVMEIDPQ MRLIREAPAS GLLDAGNGFG QIAGMTAMEI AIEKAKSAGS AVIGIANSNH FGVAAYFAER ATRAGMVGIV LTNSSPAMTA FNTRIPLIGT NPIAFGIPAG AERPIILDMS TSLVARGKIR LASLTGKPIP LGWAYDDRGL STEDAHAALK GSLAPIGGPK GAGLSLIIDL LTGVLTGTGL TGEVKNITDI SGPSRTGHLM IAFDVSRFIS PELFKSSVDS VVANIKAMPS ADGGPVFMPG EMEAIGAERR ARDGIGVPRD IVDTLRGLSV TYLGELRL
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