Gene Smed_5908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5908 
Symbol 
ID5320210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp873654 
End bp874700 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content63% 
IMG OID640777603 
Productmalate/L-lactate dehydrogenase 
Protein accessionYP_001314535 
Protein GI150377940 
COG category[C] Energy production and conversion 
COG ID[COG2055] Malate/L-lactate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.767932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.259263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATC ATGTCATCCT TGAGGCTGAA GCGCTGCGAG GCTTCACCGA AGACGTCCTC 
AAAGCTGCCG GTATGCGCCC GCAACCGGCG GCAACCGTCG CCGATACGCT TGTTTACGCC
GATCTGCGCG GCGTTTCTTC TCATGGCGTC GCGCGGCTGG GTTCCTATCT GGATCGTATC
CGTGCCGGCG TCATGGAGAT CGATCCGCAG ATGAGGCTCA TCCGCGAAGC GCCGGCAAGC
GGCCTGCTCG ACGCAGGCAA CGGCTTCGGC CAGATCGCCG GCATGACGGC AATGGAGATT
GCGATCGAGA AGGCAAAATC CGCAGGCAGC GCGGTGATCG GCATTGCCAA TTCCAATCAT
TTCGGCGTTG CCGCCTATTT TGCCGAACGG GCGACGCGCG CCGGCATGGT GGGGATCGTG
TTGACGAACT CCTCCCCCGC CATGACGGCC TTCAATACCC GCATTCCGCT GATCGGCACC
AATCCGATCG CCTTCGGAAT CCCCGCCGGC GCCGAGCGGC CGATCATACT GGACATGTCG
ACCTCGTTGG TCGCTCGCGG CAAGATCCGC CTCGCCTCGC TCACCGGCAA GCCGATCCCT
CTGGGCTGGG CCTATGACGA TCGGGGGCTT TCGACCGAAG ACGCGCATGC CGCGCTGAAG
GGCAGCCTTG CTCCTATCGG AGGACCGAAG GGGGCCGGCC TGTCGCTGAT CATCGATCTT
CTGACCGGCG TCCTGACCGG TACGGGGCTG ACCGGCGAGG TGAAGAATAT CACCGACATT
TCCGGCCCCT CCCGCACCGG ACATCTGATG ATCGCTTTCG ACGTCAGCCG ATTCATTTCG
CCGGAACTCT TCAAGTCGAG TGTCGACAGC GTAGTCGCCA ACATCAAGGC AATGCCGTCG
GCCGACGGCG GTCCGGTCTT TATGCCGGGA GAAATGGAGG CCATAGGGGC CGAAAGACGT
GCTCGGGACG GCATCGGTGT TCCGCGTGAC ATCGTCGATA CGCTTCGGGG GCTCTCCGTC
ACCTATCTCG GAGAGCTCAG ACTGTAG
 
Protein sequence
MSDHVILEAE ALRGFTEDVL KAAGMRPQPA ATVADTLVYA DLRGVSSHGV ARLGSYLDRI 
RAGVMEIDPQ MRLIREAPAS GLLDAGNGFG QIAGMTAMEI AIEKAKSAGS AVIGIANSNH
FGVAAYFAER ATRAGMVGIV LTNSSPAMTA FNTRIPLIGT NPIAFGIPAG AERPIILDMS
TSLVARGKIR LASLTGKPIP LGWAYDDRGL STEDAHAALK GSLAPIGGPK GAGLSLIIDL
LTGVLTGTGL TGEVKNITDI SGPSRTGHLM IAFDVSRFIS PELFKSSVDS VVANIKAMPS
ADGGPVFMPG EMEAIGAERR ARDGIGVPRD IVDTLRGLSV TYLGELRL