| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5903 |
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| Symbol | |
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| ID | 5320205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 868905 |
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| End bp | 869891 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777598 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001314530 |
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| Protein GI | 150377935 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.22808 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCCAA AGGTTCTGAT GACCGCAAAG ACGCTTGCTA CGCCGGGGCT GGCCCTGCTC
GAGCAAGCCG GCTGCGCGGT CTCCTTTCTT AAGGAAGGCA CGGAAGCGGA ACTCGCAGAA
AGTCTGCGGT CGACTCCCTT CGATGCCGTC ATCTCCCGCA CCTTGGCGCT ACCGGCAATG
ATGATCGAGA CGGCACCTGC CCTGCGCGTC ATCTCCCGCC ACGGTGTCGG CTATAATAAT
GTCGATATCG AAAGCGCCAC CCGGCGCGGA GTGCCGGTGC TGATTGCCGA TGGCGCGAAT
GGCAAATCGG TCGCCGAACT TGCCGTCGGC CTCGCCCTTT CGGTGGCCCG CAAAATCACG
ACGCAAGACG CCTCGATTCG CGCCCGCCAG TGGAATCGCT CTGCCTACGG CCTGCAATTT
GCCGGCAAGA CGGCAGGGAT CGTCGCCTTC GGTGCGATCG GCCGGCGGGT AGCGGAAATT
CTGAGGGCAA TGGACATGCG GATCATCGCC TTCGACCCCC ATGCGCGCGA CCGTTCCACG
ACCGGGGTCG ATTGGACCGA GACGCTGGAC GAACTCCTGC AGGAAAGCGA TCTCGTTTCG
CTTCATTGCC CGTTGACGCC GGAGACCCGC AACATGATCA CCGCGCCGCG GCTGGCGCGG
ATGAAGCCGG GCGCAATCCT GATCAATACC GCGCGTGGCG GCCTGATCGA CGAAAAGGCA
TTGGCCGAGG CCGTTCTTTC CGGACATCTT GCCGGTGCAG GTCTCGACAC CTTCGCCGAT
GAACCCCTCC CCGCCGACCA TCCGTTCCTT TCTCTGCCGC AGATCGTGAT GACTCCGCAT
ATGGGCGGAA GCACCGACGT CGCGCTTGAT GGCGTTGCGA TCAGCGCAGC GCGCAACGTG
CTCGACGTCC TGATCGACGG CAAGGTCGAT CGCCGTCTTC TCGTCAACCC GGCGGTTCTC
GAACACCGCA CCGTCGAAGC AAAGTGA
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| Protein sequence | MGPKVLMTAK TLATPGLALL EQAGCAVSFL KEGTEAELAE SLRSTPFDAV ISRTLALPAM
MIETAPALRV ISRHGVGYNN VDIESATRRG VPVLIADGAN GKSVAELAVG LALSVARKIT
TQDASIRARQ WNRSAYGLQF AGKTAGIVAF GAIGRRVAEI LRAMDMRIIA FDPHARDRST
TGVDWTETLD ELLQESDLVS LHCPLTPETR NMITAPRLAR MKPGAILINT ARGGLIDEKA
LAEAVLSGHL AGAGLDTFAD EPLPADHPFL SLPQIVMTPH MGGSTDVALD GVAISAARNV
LDVLIDGKVD RRLLVNPAVL EHRTVEAK
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