| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5901 |
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| Symbol | |
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| ID | 5320203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 865787 |
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| End bp | 867856 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640777596 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001314528 |
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| Protein GI | 150377933 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0361362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.5857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCTG CCTATCTGGA AAAGCTCAAT GACCGCCAGA GGGAGGCGGT GGAACATGGG
ATCGGTCGCC CAAGCAGTGA AATCGGTGGG CCGCTGCTCA TCATCGCAGG CGCAGGTTCA
GGAAAAACCA ATACGCTCGC CCATCGCGTC GCCCACCTGA TCGTCAACGG CGCAGATCCA
CGCCGTATCC TGCTCATGAC CTTTTCCCGC CGCGCCGCTT ACGAAATGAC CCGTCGCGTA
AAAAGCATCT GTCGGCAGGT GCTTGGGAAC CAAGCCGCCG CCATCGGCGA CGCCTTGACC
TGGGCCGGGA CCTTCCACGG GATCGGCGCG AGGCTCCTTC GCATCTATGC CGAGCAGATA
GGCGTAAACG TGGATTTCAC CATTCACGAC CGGGAAGATG CCGCAGACCT GATGAATCTC
ATACGCCACG AACTCGGCTT TTCACGGACC GAAAGCCGCT TTCCGACAAA GAACACCTGC
CTTGCCATCT ATTCGCGCGT GGTCAATTCC GAGAGCTCGA TCTCCGAGGT TCTCAAGTCC
TCCTATCCCT GGGTATCGGC GTGGGAGGAG CAGCTGAAGC AGCTCTTCGC GGGCTATGTG
GAATCCAAGC AGGCGCAGAA CGTTCTCGAC TATGACGATC TCCTGCTCTA CTGGGCGCAA
ATGGTGTCCG ATCCGGGACT CGCCGAGGAT GTCGGCACGC GCTTCGACCA TATCCTGGTC
GACGAGTATC AGGACACGAA CCGCCTTCAG TCCTCGATTC TGCTGTCCCT CAAGCCCGCC
GGCCGGGGGC TCACGGTGGT CGGCGACGAT GCGCAGTCGA TTTATTCTTT CCGGGCGGCG
ACGATCCGCA ACATTCTCGA CTTTCCGAAA GCGTTTTCTC CGGCGCCCGC TGACGTGATC
ACACTCGAGC GCAATTACCG CTCGACGCAG CCGATCCTCG CGGCTGCCAA CGGCGTCATC
GACCTCGCCC GCGAGCGTTT CACCAAGAAC CTCTGGACGG ACAGGCAGTC GGAACAGCGG
CCGCGGCTCG TTTCGGTCAA GGATGAGGCC GATCAGGCCA ACTACATCGT GGAGCAGGTT
CTGGGAAACC GCGACCTTGG CGTTCCGCTG AAGCAACAGG CGGTACTGTT CCGGTCATCG
AACCACAGCG GAGCCTTGGA AGTGGAATTG ACACGCCGCA ACATTCCCTT CGTGAAATTC
GGCGGTCTGA AGTTTCTCGA TGCCGCTCAC GTGAAGGATC TGCTGGCCGT TCTCCGTTTT
GCGCAGAACC CACGCGACCG CGTCGCCGGC TTCCGCCTTC TCCAGATGCT TCCGGGAGTT
GGCCCTCAGA CGGCCGGAAA GATCCTCGAC ACAATAGCCG CCGATCCCGA ACCGCTCTTT
TCGCTCACCG AAATTCCATC TCCGCCGAAA ACTGGGGATC ATTGGACCGA GTTCGTAACT
CTGCTGTCGA CCTTGAGAAA AGCCGGCGTC GGATGGCCCG AAGAAATCGC TTCCGCCCGG
GCCTGGTACG AACCGCACCT CGACCGCATC CATGAGGATG CCGGAACGCG CAAAGCGGAT
CTGCTGCAGC TGGAGCAGAT CGCCTCCGGC TATCCCAATC GCGAGCGATT CCTTACGGAA
CTTACGTTGG ATCCGCCGGA CGCCACCAGC GACCAGGCCG GCGTACCGCT TCTCGACGAA
GACTATCTGG TCCTATCAAC CATCCATTCT GCCAAGGGCC AGGAGTGGCG CTCCGTCTTC
ATGCTGAACG TGGTGGACGG GTGCATTCCT TCCGACCTCG CGGCCGGCAC GACGGCCGAG
CTCGAAGAAG AGCGCCGCTT GCTTTACGTC GGCATGACGC GGGCGCGGGA CAGTCTGGAC
CTTCTGACGC CGCAGAGATT TTTCACGGGG GGACAAAATG CACTGGGTGA CCGTCACGTC
TACGCTTCGC GGACCCGGTT CATCCCAGCC ACGCTCCTTC AGTTTTTCGA AACGACGAGC
TGGCCGAAGG TCACCGCGAA TGCCGGCGAC CGAAGTGCCC GACAAATCCG AGTGGATGTC
GGAGCCCGGA TGCGGTCGAT GTGGAAGTGA
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| Protein sequence | MNPAYLEKLN DRQREAVEHG IGRPSSEIGG PLLIIAGAGS GKTNTLAHRV AHLIVNGADP
RRILLMTFSR RAAYEMTRRV KSICRQVLGN QAAAIGDALT WAGTFHGIGA RLLRIYAEQI
GVNVDFTIHD REDAADLMNL IRHELGFSRT ESRFPTKNTC LAIYSRVVNS ESSISEVLKS
SYPWVSAWEE QLKQLFAGYV ESKQAQNVLD YDDLLLYWAQ MVSDPGLAED VGTRFDHILV
DEYQDTNRLQ SSILLSLKPA GRGLTVVGDD AQSIYSFRAA TIRNILDFPK AFSPAPADVI
TLERNYRSTQ PILAAANGVI DLARERFTKN LWTDRQSEQR PRLVSVKDEA DQANYIVEQV
LGNRDLGVPL KQQAVLFRSS NHSGALEVEL TRRNIPFVKF GGLKFLDAAH VKDLLAVLRF
AQNPRDRVAG FRLLQMLPGV GPQTAGKILD TIAADPEPLF SLTEIPSPPK TGDHWTEFVT
LLSTLRKAGV GWPEEIASAR AWYEPHLDRI HEDAGTRKAD LLQLEQIASG YPNRERFLTE
LTLDPPDATS DQAGVPLLDE DYLVLSTIHS AKGQEWRSVF MLNVVDGCIP SDLAAGTTAE
LEEERRLLYV GMTRARDSLD LLTPQRFFTG GQNALGDRHV YASRTRFIPA TLLQFFETTS
WPKVTANAGD RSARQIRVDV GARMRSMWK
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