| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5883 |
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| Symbol | |
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| ID | 5320185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 846809 |
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| End bp | 847879 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640777578 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001314510 |
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| Protein GI | 150377915 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.92391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAGA ACCCGCCCCG ATCCACATCC GTCACCGTTG CCGACGTCGC ACGCAAGGCA
GGCGTCTCCA AGGCGACGGC AGCGCGCGTG CTGGGCGGCT ACGGAACGGT GAGCGACCCG
GTGCGCGACG CCGTGACAGC CGCTGCCCGG GCACTCGATT ACCGTCCGAA CGAGCTCGCC
CGCAGCATGA CGACGGGCCG CTCCGGCACG ATCGGCGTCG TGGTGGGCGA CATAGAGAAC
CCATTTTTCA GTCTTGCCAT GCGGGGCATC ACCGACGTGG CCCGCCAGGC CGGCTTTACG
GTCATCCTCA TAAATTCCGG CGAGGACGTG GCTGTCGAGA AGGCGGCCAT TCGCACCCTG
CTGGCCAAGC GCGTGGACGG CTTGATCGTC TCGCCGGCCA AGGAAAGCAA TGTCGATCAC
CTTCAGGAAG CCGCCCGCTC GGGCCGGCCG CTGGCGCTGC TCGACCGCGG CAGTGAGACG
CTCGACGTTG ACACCGTTAT TGCCGATGAC AGACACGCCG CCGAAGGCAT CACGCGACGG
CTCATTGCGC TCGGCCATCG CCGCATCGCC TATATCACTG CGTGCGACAC ACCGGATCAT
GTTTTCCGCG TGCCCTCAGA CGTAAATACG GGCTCGGTGC GCCGGCGCGT CGAAGGTTTT
CTTGGCGTCT GCCGGGAGGC TGGCCTTCAG GGAATGGAAG GCTGGGTGCG TGTGGGCGCG
ATCACGCCGG ACCATACGCG GGGCATCGTC TCGGCGATGT TGCAGTCGAG CGAGCGCCCG
ACCGCGATCA TCGCCTCCGA CAGCGTGATC GGCCTCGAAG TTTTCAAGAC CAGCCGCGCA
GCCGGCATTG CTATCCCGGA CGAGCTGTCG CTCGTATCGT TCCATGACGC CGATTGGACC
TCGGTCACCT CGCCCCCTGT GACGGTGGTG AGGCAACCCG TCTATCGCCT GGGCGAAACA
GCCGCGAAAC TGCTGGTCGA GCGGCTGAAC GGATATGAAG CAAGTGCCCG CCGAGTCGTG
CTGCAAACCG AACTCATCGA ACGGGCTTCC GTCGCCGACG CGCCGGCATG A
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| Protein sequence | MDQNPPRSTS VTVADVARKA GVSKATAARV LGGYGTVSDP VRDAVTAAAR ALDYRPNELA
RSMTTGRSGT IGVVVGDIEN PFFSLAMRGI TDVARQAGFT VILINSGEDV AVEKAAIRTL
LAKRVDGLIV SPAKESNVDH LQEAARSGRP LALLDRGSET LDVDTVIADD RHAAEGITRR
LIALGHRRIA YITACDTPDH VFRVPSDVNT GSVRRRVEGF LGVCREAGLQ GMEGWVRVGA
ITPDHTRGIV SAMLQSSERP TAIIASDSVI GLEVFKTSRA AGIAIPDELS LVSFHDADWT
SVTSPPVTVV RQPVYRLGET AAKLLVERLN GYEASARRVV LQTELIERAS VADAPA
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