Gene Smed_5877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5877 
Symbol 
ID5320179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp840260 
End bp841042 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content62% 
IMG OID640777572 
Productstreptomycin 3''-adenylyltransferase 
Protein accessionYP_001314504 
Protein GI150377909 
COG category[R] General function prediction only 
COG ID[COG1708] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.268978 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCAG CGACACCACC ACAGCCGAGC GACCAGGCGC TGGCAGCATC GGAGACGATC 
AGCAGGATCC TTCAGGACGC GCTTCTCGCC GTCTATCTGC ATGGATCGGC CGTTTCGGGT
GGGTTGCGGC CGCAGAGTGA CGTTGACCTC CTGGCCGTCA CAGACCGCCC CATGACTGAC
GAACAACGCA GAGCTCTTCT TTCGGCTTTG CTGCGCATTT CCGGGCGTCA TCCCCGCCCG
CCGGGAGCTC CACGCTGCGT CGAATTGATG GTGTTTCTGC AGGTAGACAT CTCCGCGCCG
ATGTTTCCCG TTCGGGCTGA ATTCATTTAC GGCGAATGGT TGCGGGATGC CTTTGAATCC
GGGCAACTCC CGATGCCGGT GTCCGATCCG GAGAATACGC TGGTGCTCGC TCAGGCTCGA
CAAGAGGCAG TGCCGATATT AGGTCCAGAG CCTACGGGGC TCCTGCCCTC CATTCCGTTG
GAACACGTCC GCGGCGCAAT GCGCGAGGCG CTTCCCGTAT TGGTCGACGG TCTCCATGGG
GATGAGCGGA ACGTATTGCT GACCCTCGCG CGGATGTGGC GCACGTCGGT CAGCGGCGAC
TTCATCACCA AGGATGCGGC GGCCGAATGG GCGGCGAACC AGATGCCGGA CACGGAAGCT
CAGACACTGC TCTATGCGCG TGACGCCTAT TTGGGCAGAG TGAATGACGA ATGGAGCAAC
CGGAAAACCG CAGCGCAGAG AACGGCAGCG CTTCTGCGTC AACGCGTGGC AGAGGCCCTA
TGA
 
Protein sequence
MQSATPPQPS DQALAASETI SRILQDALLA VYLHGSAVSG GLRPQSDVDL LAVTDRPMTD 
EQRRALLSAL LRISGRHPRP PGAPRCVELM VFLQVDISAP MFPVRAEFIY GEWLRDAFES
GQLPMPVSDP ENTLVLAQAR QEAVPILGPE PTGLLPSIPL EHVRGAMREA LPVLVDGLHG
DERNVLLTLA RMWRTSVSGD FITKDAAAEW AANQMPDTEA QTLLYARDAY LGRVNDEWSN
RKTAAQRTAA LLRQRVAEAL