| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5875 |
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| Symbol | |
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| ID | 5320177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 838242 |
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| End bp | 839309 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777570 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001314502 |
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| Protein GI | 150377907 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.563047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCTTGA GAATTGAACA AAGGCCGGAA CCGTCCGCCC AGATGCGGAT CGCCGCTCCG
GTGATCGCGA CGGCGCTGAC CTTTCTTGCC GGCTCCGTCC TGTTTGCCGC GCTGGGCTAT
GATCCGCTGA TCACACTGCA CGCTTTCTTC GTCGCCCCGC TCAATTCCAT CAACGGCCTG
TCCGAATGGC TGCTGAAGGC TTCGCCCCTG ATCCTGATCG CTTGCGGGCT CGCGGTCGGA
TTCCGTGCCA ATATCTGGAA CATCGGCGCC GAAGGACAAC TGATCATCGG TGCCATCGCC
GCCTGCGGCG TCGGCCTCTT TTATCCCAAT CCGGAGAGCC CGCTCCTGCT GCCGCTGATG
TTTCTCGCCG GCACAGGCGC CGGCATGGTT TGGGCGGCGA TCCCGGCTTT TCTCAGGGCC
CGCATGAACA CCAACGAGAT CCTCGTCACG CTCATGCTGA CCTATATCGC GACGCTGTTG
CTATCCTTTC TGGTGCACGG CCCGTGGCGC GATCCGGCTG GGTTCAATTA CCCGCAAACC
GCGCTTTTGC CCCCGGCGGC AATGTTCGAG CCTTTCGATT ATGCCTATCG GCTCAATCCA
TCTGTCTTCA TCACGGCCGT GGCGGTGGTG CTTATGTGGC TCTTCGCCGA TCGGAGCTTT
CTCGGCTACA AGATGTCGGT GAGCGGCGCC GCTCCGCTTG CGGCACGCTA TGCAGGTTTT
CGTGAGTCCT CCGCAGTCTG GACAGGATTG CTTGCCGGCG GCGCGGCGGC AGGAATTGCC
GGCATGGCCG AAGTCGCCGG TCCTCTCGGG CAATTGTCGC CGCAGATTTC GCCCGGCTAT
GGCTTTGCCG CAATCATCGT TGCGTTCATC GGACGCCTGA ACGCATTCGG CATCGTCCTC
GGGGGGCTTT TGATGTCGCT TCTCTTCCTC GGCGGCGAAA CCGTTCAGAT GACGCTCGGC
CTTCCGGCAG CGCTCACCCG CATCTTCCAA GGGGTTCTTC TGTTCTTTCT GCTCGCCGCC
GATTTCTTCA TCTACTACCG CCTTCGCCAC ATTCCGGAGC ACGCGTGA
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| Protein sequence | MRLRIEQRPE PSAQMRIAAP VIATALTFLA GSVLFAALGY DPLITLHAFF VAPLNSINGL
SEWLLKASPL ILIACGLAVG FRANIWNIGA EGQLIIGAIA ACGVGLFYPN PESPLLLPLM
FLAGTGAGMV WAAIPAFLRA RMNTNEILVT LMLTYIATLL LSFLVHGPWR DPAGFNYPQT
ALLPPAAMFE PFDYAYRLNP SVFITAVAVV LMWLFADRSF LGYKMSVSGA APLAARYAGF
RESSAVWTGL LAGGAAAGIA GMAEVAGPLG QLSPQISPGY GFAAIIVAFI GRLNAFGIVL
GGLLMSLLFL GGETVQMTLG LPAALTRIFQ GVLLFFLLAA DFFIYYRLRH IPEHA
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