| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5870 |
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| Symbol | |
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| ID | 5320172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 831684 |
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| End bp | 833450 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640777565 |
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| Product | ferredoxin |
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| Protein accession | YP_001314497 |
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| Protein GI | 150377902 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
[COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATA CCGCCAAGAC CAGATGGCAT CCCATCGCCG CGAGCTATGA CCTGCCGTTC
CGCCACGTGT TTCACGCCCA ATTGCTCGGC CGCGAATTCG CCGTCTGGCG CGCCGACGAC
GGCTACGTCA ACATCTGGGA AAACCGCTGC CTTCATCGCG GCGTCCGCCT GTCGATCGGC
ATCAACGACG GTCGGGAGCT GAAATGTCAG TATCATGGCT GGCGCTATTC CAACCGCACC
GCCGGCTGCA CCTATATACC CGCGCATCCG GCCGACGCGC CGGCACGCAC CATCACCAAC
CGCACCTTCG CCGGCGTCGA GCGTTACGGT CTGGTCTGGT CGGCTGAGGA GCCGCATGGA
CGGGTGCCGG ACGTTGCCGG CCTCCGAGAA GGCGAACAAC TGGCGCTTCG CGGTATCCCG
CTCAATGCGC CGGCCGATGC GGTTGTCTCG GCGCTGACGG GATATCGCTT TCAGCCGAAT
GGCAGGCTTC AAGGTAACAC GGCGAATGTG TCGCTGGAGG GGAGCGATAC TTTTTCGGTG
GCGCTCCGGG CCTACGAGGA GGGGGCTGAG ACGCTTGTCG TCTTCTTCGT CCAGCCGGTC
GACTCCAGCC GATCGGTCAT CCGCGGCGTA CTCGATGCCG GCCCCCAGGG CGCCGAACGG
CTGGCCATCC TGCGCCATCA TAACGAACGG CTTTCGAAGC TCCGCGAGAT CGCGGAGCGC
GAGGCTCAAG CCGCACCGCA GCCGGCGCCG CTCGAGCCGG TAATCGAGCG CGTCTCGCCG
GAGCTTGCCG AGATGCCGGA AATGACCGCC CATGGCCGCA AGGCGACCAT CCGTGTGACG
GTCGCGCGGA AGTGGCTGGC TGCCGACGGG ATCGCCGCGT TCGAGCTGCG TCCGGTCCAG
GGGCTGCTGC CCACTTTCCA ACCCGGCGCC CATATCGACG TGCACATGCC GAATGGGCTG
GTCCGGCAAT ACTCGATCAC CAATGGTCCG GGCGAAAGCG ACAGCTATGT CATTGGTGTC
AAGCTTGAGC GGGATTCGAT GGGGGGCTCG CTGTGCATGC ATGAGACCGT CCGCGAGGGC
GACCTTCTCG CCATCTCGGA GCCGCGCAAC AATTTCCCAC TGCGCCGCGA TGCGGTGCGC
ACCATCTTCG TTGCAGGCGG CATCGGCGTT ACGCCGCTCC TTGCAATGGC GCAGGCGCTC
AAGAATCAGA ACCTCGACTA CGAGTTCCAC TATTTTGCCC AAAACCAGGA ACAACTCGCA
TTCCCGGAAA AGACCGCGCT CCTGGGCGAG GCACTGAAGC CCCATCTGGG GTTTCTCCCG
GAAACGACTG CCGCTAAGCT TAAGGAGATT CTTTCCGGGT ACCGGCCCGA TATGCACGTC
TATCTATGCG GGCCCGGGCC TATGTTGGAG GCGGCGCGCC GGATCGCAGC GGACCTCGGC
TGGCCCGAAA CCGCGGTGCA TTTCGAATAT TTCAAGAACA CCAACACGAT CGATGACAGC
TCGAGCTTCG AGGTGGCCTT AGCGCGCTCC TGCGTGACTT TGCAGGTGAC CGCCGGCAAA
ACCATTCTGG AGACCATGCG CGAAGCCGGA ATCGACATGC CCTCATCCTG CGAGCAGGGT
GCCTGCGGCA CCTGTCTTGC GACGGTGATC GAGGGCGAGC CAGACCACCA GGACGTCTAT
CTCAACGATG CCGAGCGCAA GTCCGGCACC AAGATCATGA CCTGCGTGTC GCGCGCCAGG
TCCGCGCGCC TCGTCCTCGA TCTCTAG
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| Protein sequence | MLDTAKTRWH PIAASYDLPF RHVFHAQLLG REFAVWRADD GYVNIWENRC LHRGVRLSIG
INDGRELKCQ YHGWRYSNRT AGCTYIPAHP ADAPARTITN RTFAGVERYG LVWSAEEPHG
RVPDVAGLRE GEQLALRGIP LNAPADAVVS ALTGYRFQPN GRLQGNTANV SLEGSDTFSV
ALRAYEEGAE TLVVFFVQPV DSSRSVIRGV LDAGPQGAER LAILRHHNER LSKLREIAER
EAQAAPQPAP LEPVIERVSP ELAEMPEMTA HGRKATIRVT VARKWLAADG IAAFELRPVQ
GLLPTFQPGA HIDVHMPNGL VRQYSITNGP GESDSYVIGV KLERDSMGGS LCMHETVREG
DLLAISEPRN NFPLRRDAVR TIFVAGGIGV TPLLAMAQAL KNQNLDYEFH YFAQNQEQLA
FPEKTALLGE ALKPHLGFLP ETTAAKLKEI LSGYRPDMHV YLCGPGPMLE AARRIAADLG
WPETAVHFEY FKNTNTIDDS SSFEVALARS CVTLQVTAGK TILETMREAG IDMPSSCEQG
ACGTCLATVI EGEPDHQDVY LNDAERKSGT KIMTCVSRAR SARLVLDL
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