| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5864 |
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| Symbol | |
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| ID | 5320166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 825905 |
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| End bp | 826879 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777559 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_001314491 |
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| Protein GI | 150377896 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.344419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTCA TTTTCTCCAC CCATCCGCTG CACCCCCAGG CCGAGGCTTT GCTGAAAGCC
GCGGGTGATT TGCGCATCGC GTCCGCTCCC GATCCCGAGA CGTTGCTTCG GGAAGGCGCG
GGTGCGGAGA TTGTCATCGT GCGCGCGCGG ATCCCACCGG CGTTTTTCCA GCTCGCATCG
ATGCTGCGTG CGGTCATCAG GCACGGCGCG GGGATCGACA TGATCCCCTA TGATACGGCC
ACGGCGGCGG GTGTGTTGAT CGCCAACGTG CCGGGCGCGA ATGCACTGAC TGTTGCGGAG
CACGTCCTCA TGGTTTCGCT TGCGCTGCTG CGTCAATTCC GTCCGATGGA CCGGGATCTC
AGAAACATCG GGTGGAGCGC TGGGCGAGCC CACAGCGACC GAGCGCTCGA TCTCGCCGGC
CGCACTATGG GCATTGTCGG CATGGGTAGT GTGGGAAAGG CGGTCTTCCG CAAAGCAAAA
TACGGGTTTG GGCTGGAGAT TGTGGCCAAC AGTCGCGCGC CGGCAAGCCT CCCCCATGGT
GTACGATTTC TTTCGGTCGA CGACTTGGTT TCGACTGCGG ACATCGTCGT TCTCTGCTGT
CCGCTTACAC CCGAGACGAC CGGGCTTGTA AGCCGCGATC GGATAGCGCG CATGAAGCCA
GGTACGATCC TCGTCAATGT GTCGCGCGGC CCCGTAGTGG ACGATGCAGC GTTGATCCAG
GCGCTAGAGG GGGGCCGTAT CGGGGGCGCG GCGCTCGACG TGTTCTCCAC CCAGCCCCTG
CCGCTCGAGC ATCCTTACTT CAGGCTCAAC AATGTGATCG TGACGCCTCA TCTCGCCGGC
ATTACCGAGG AGAGCATGAT GCGGATGGGG ACGGAAGCTG CGGCGGAAGC CATCCGCGTC
TTGGAAGGCG GGTTGCCCAC TAATCTGCGC AACCCTGAGG TTATTCAACA CTATAGGCGA
AGGTTCCCGG CGTAA
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| Protein sequence | MSVIFSTHPL HPQAEALLKA AGDLRIASAP DPETLLREGA GAEIVIVRAR IPPAFFQLAS
MLRAVIRHGA GIDMIPYDTA TAAGVLIANV PGANALTVAE HVLMVSLALL RQFRPMDRDL
RNIGWSAGRA HSDRALDLAG RTMGIVGMGS VGKAVFRKAK YGFGLEIVAN SRAPASLPHG
VRFLSVDDLV STADIVVLCC PLTPETTGLV SRDRIARMKP GTILVNVSRG PVVDDAALIQ
ALEGGRIGGA ALDVFSTQPL PLEHPYFRLN NVIVTPHLAG ITEESMMRMG TEAAAEAIRV
LEGGLPTNLR NPEVIQHYRR RFPA
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