| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5835 |
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| Symbol | |
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| ID | 5320137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 800292 |
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| End bp | 801266 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777531 |
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| Product | putative ABC transporter, periplasmic solute-binding protein |
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| Protein accession | YP_001314463 |
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| Protein GI | 150377868 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGA AATTGGTAGC AGGAACGGCC CTCGGGCTGA CGCTGATGGC CCCGGCCGCC
AGCGCGGAGG GACTCAATAT CGCCTTCATC AGCCATTCCT CGGCCTCGAA TACATTTTGG
CAGGCGGTGA AGAAGGGCTA TGATGACGCT TGCGAAAAGG TCGGCGCCTC GTGCCAGCTG
ATCCTCACGC AGACGGAAGG CGCAGTCGAA CAGGCCGTGG CCAACCTGCA GGCGGCGATC
GCCTCCAGGC CGGACGCGAT TTTCGTCGCG ATCGTAGACA ACAATGCCTA TGACAACCTG
ATCAAGGAAG CCGTCGATTC CGGCATCCTT GTGCTCGCGG TCAATGGCGA CGACAGCGAA
GGCGCCAAGG GCAACGCCCG TAAGGCCTTC ATCGGCCAGG GTTTCTCCGC TGCCGGCTAC
TCGCTCGCCA AAGCCCAATC GGAAAACTTC CCGAAGGAGG GCCCGCTCAA CCTTGTGGTC
GGCGTCAATG CGCCGGGCCA GACCTGGTCG GAGCAACGCG CCGGCGGGGT TACGAAGTTC
CTCGAGGAGT ATAAGGCCGA GCACTCCGAT CGCGAGATCA ACATTACCCG TGTCGACTCT
GCGACGGACC TCGCGCTGAC GGCCGACCGT ATCGGCGCCT ACCTCAACGC CAATCCGGAT
ACGACCGCCT ATTTCGATAC GGGCTACTGG CATGCCGGTG TTGCAAAAGT ACTGAAGGAT
CGCGGCATCG AGCCCGGCAA GGTGCTGCTC GGCGGATTCG ACCTCGTGCC CGAGGTGCTG
CAGCAGATGC AGGCGGGCTA TGTCCAGGTG CAGGTCGACC AGCAGCCATA CATGCAGGGC
TTCATCCCCG TCATGCAGGC CTATCTCTGG AAGACCGCCG GGCTGACGCC CTCCGACGTC
GATACGGGGC AGGGCATCGT CACTCCTGAG GACGTGCCGA CGATCCTCGA ACTGGCGAAG
CAGGGTCTGC GCTGA
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| Protein sequence | MIRKLVAGTA LGLTLMAPAA SAEGLNIAFI SHSSASNTFW QAVKKGYDDA CEKVGASCQL
ILTQTEGAVE QAVANLQAAI ASRPDAIFVA IVDNNAYDNL IKEAVDSGIL VLAVNGDDSE
GAKGNARKAF IGQGFSAAGY SLAKAQSENF PKEGPLNLVV GVNAPGQTWS EQRAGGVTKF
LEEYKAEHSD REINITRVDS ATDLALTADR IGAYLNANPD TTAYFDTGYW HAGVAKVLKD
RGIEPGKVLL GGFDLVPEVL QQMQAGYVQV QVDQQPYMQG FIPVMQAYLW KTAGLTPSDV
DTGQGIVTPE DVPTILELAK QGLR
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