| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5828 |
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| Symbol | |
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| ID | 5320130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 794514 |
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| End bp | 795263 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640777524 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001314456 |
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| Protein GI | 150377861 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.143901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.269428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACATT TGAAAGACAA GGTTGCCGTG ATTACCGGCG GGAACAGCGG TATCGGCAAG
GCGACTGCGC GCTTGTTTGC ACAGGAAGGC GCGCAGGTTC TTATCACAGG CCGGCGACAG
AACGTCGTAG ATCAGGTGGT GGATGAAATA GGCAACGGCG TCATTGGCAT CGTTGGCGAT
GTTGCCGACC TTGAACACCA TCAAAAGCTT GCAGAGATAG TGAAGAGCCG GTTTGGCAGC
TTGGACATCT ACATGGCCAA CGCCGGGATC ATCAACCTTA CCGCTTCCGG CACCGTCACA
CCGGAAGACT ATGACAGGCA CTTCGCCACC AATACGCGCG GAGTGTTTTT TGGCGTGCAG
GCGATGGAAC CGTTGATCCG CGATGGTGGC AATATCATTG TCACGAGCTC GCTGGCTGCC
ACGAAAGTTC TGCCGGATCA TGCCGTTTAT GCCGGCTCCA AAGCCGCCAT CGCCGCATTT
GCAAAGAACT GGGCGATCGA GTTCAAGCCC CGAAAGATCC GCGTTAACAT CTTGAGCCCG
GGACCGGTAG ATACTGCGAT CCTCGGCAAG CTTGGAGTTT CGGATGCCGA TCGCCCGGCG
CTCGAAAGCC ATTTGGCTAC CATCATCCCG GCTGGCCGTC TCGGACAGCC CGAAGAACTG
GCCCGCGCCG CTCTCTTTCT CGCCTCTGAG GCGGGTAGCT TCGTCAATGG CGTAGAGTTG
CATGTCGACG GCGGTATGAC CTTGGCTTGA
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| Protein sequence | MQHLKDKVAV ITGGNSGIGK ATARLFAQEG AQVLITGRRQ NVVDQVVDEI GNGVIGIVGD
VADLEHHQKL AEIVKSRFGS LDIYMANAGI INLTASGTVT PEDYDRHFAT NTRGVFFGVQ
AMEPLIRDGG NIIVTSSLAA TKVLPDHAVY AGSKAAIAAF AKNWAIEFKP RKIRVNILSP
GPVDTAILGK LGVSDADRPA LESHLATIIP AGRLGQPEEL ARAALFLASE AGSFVNGVEL
HVDGGMTLA
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