Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_5807 |
Symbol | |
ID | 5320109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009621 |
Strand | + |
Start bp | 778017 |
End bp | 778292 |
Gene Length | 276 bp |
Protein Length | 91 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640777508 |
Product | phage transcriptional regulator, AlpA |
Protein accession | YP_001314440 |
Protein GI | 150377845 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.600163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0888575 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCCG TTAGCGAAAG GCCCGTCAAA CGTTCGATCC GGAGGAACGA GCTGCGAGAA ATCGTTCCTC TGGCGGACAG CACCATTTAC GAGATGGAGC AGCGCGGAGA ATTTCCACGC CGCTTTGGCC TTTCACCCAG ATGCGTCTGG GATCTTGCCG AGGTCGAGGC GTGGCTCGAA AGCCCGCGCA CGCGGCCAAT CCCGCGCGCC AAACACCCCG ACGTCACCCA GCGGAAGTTC CGGCCGGTCA AAGGGCAGGG TCGGGCTCAA GCATAG
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Protein sequence | MPSVSERPVK RSIRRNELRE IVPLADSTIY EMEQRGEFPR RFGLSPRCVW DLAEVEAWLE SPRTRPIPRA KHPDVTQRKF RPVKGQGRAQ A
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