| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5805 |
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| Symbol | |
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| ID | 5320107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 776359 |
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| End bp | 777600 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777507 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001314439 |
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| Protein GI | 150377844 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0420791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATG CCCGCCCCGC CGAAACCGTC ATGTCTCTCG ATGTTCTCCT CAATGAGGTG
AAGGTCGGCA CGATCGTCAG GACACCGGGC GACTTCAACG CCTTCAGCTT CGATCCTGCC
TACCGCGCGA GCGGAGGGCA TCCTGTGTTG AGCTTGTCCT TCCGCGCGGC GACGGGAGGA
TTGCGCAAGG ATCCACGCCC GGTGGCGGGA GCTTTGCCGG CCTTCTTCGC CAACCTCCTG
CCCGAGGACA AACTGCGCGA GGCGATGGAA AAGCATCACG CCCGGGCCGT CCGGCCCGGC
AATGATTTCG ATCTGCTGGC CGCGTTGGGC GCCGACCTGC CAGGCGCTGT GCGGGTTGTC
CCGAGTAACG GGGATATCGT CGCCGCAACG GCTGCAGTTG AGGGCGAGCC GAAAGCGCGC
TTCTCGCTCG CTGGCGTGCA GATGAAGCTT TCGGTGATGA AGAACACCGG CAAGGGCGGC
GGATTGACAG TGCCGCTCGG GGACAGCGAC GGTCAGTACA TCGCCAAATT TCCTTCGACC
GCCTTTCCAG GCGTGTCGGA GAACGAGTTC GCCAATCTCG CGCTGGCGGA AGCGATCGGC
ATGGACGTGC CCGAACGCGA GCTGGTCGGC AAAGACCAGT TCGAAGGCAT TCCCGAAGAG
TTCGAGACCC TGGCCGAGGG GCTGGTCCTT CTTATCAGGC GGTTCGATCG CGCCGACGGC
GCGCGACGAA TCCATATCGA GGATTTCGCC CAGGTCTTCG GCATCTATCC GGCACGAAAA
TACGAAGGCG CGGCCTATCA TGACATAGCC GCGGCGCTGA ATGTGGCGAT CTCGCCGGTA
GCGGCGCTGG AGTTCGTCCG CCGCCTGACC CTGTCGGTGG TCATGGGCAA TGGCGACATG
CACCTGAAAA ACTGGTCACT GATCTATCCC GGTGACGGTA ATTCGCCCGC CATGGCGCCG
ATCTACGACG TGCTTTCGAC GGTCCCCTAT ATTCCGGCTG ACAATCTGGC TTTGTCACTT
GGCGGCGAGC GCGCGTTCAA GGCACTGACG CTGCCACGGT GGAAGGCTTT CGCCAATCGG
GCGCGGCTTC CAGAACCCGC CGTCCTCAAA ACTGTCCGCG AGACGGTCAA GCAAATCGAT
GCGCATTGGT GGAAACTGCC GGAACGTGAT GCTGTCCCTT CGATCGTTCT GGAGCGGATC
GACGCCCATG TGAGGGCCAT GATGCCTGTC CTCTCGGATT GA
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| Protein sequence | MNNARPAETV MSLDVLLNEV KVGTIVRTPG DFNAFSFDPA YRASGGHPVL SLSFRAATGG
LRKDPRPVAG ALPAFFANLL PEDKLREAME KHHARAVRPG NDFDLLAALG ADLPGAVRVV
PSNGDIVAAT AAVEGEPKAR FSLAGVQMKL SVMKNTGKGG GLTVPLGDSD GQYIAKFPST
AFPGVSENEF ANLALAEAIG MDVPERELVG KDQFEGIPEE FETLAEGLVL LIRRFDRADG
ARRIHIEDFA QVFGIYPARK YEGAAYHDIA AALNVAISPV AALEFVRRLT LSVVMGNGDM
HLKNWSLIYP GDGNSPAMAP IYDVLSTVPY IPADNLALSL GGERAFKALT LPRWKAFANR
ARLPEPAVLK TVRETVKQID AHWWKLPERD AVPSIVLERI DAHVRAMMPV LSD
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