Gene Smed_5804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5804 
Symbol 
ID5320106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp776061 
End bp776366 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content64% 
IMG OID640777506 
ProductXRE family transcriptional regulator 
Protein accessionYP_001314438 
Protein GI150377843 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.365754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0338567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCG AGGCAGAAGC TCTGGACATG ATCGGCGACC ATTTTCGGCG CGCACGGCTG 
GCGGCGGGCC TGACGCAGGA ACAGGTCGCC GATCTCGCCG GCATATCCCG TCCCCGCTAT
CGCGATGTCG AAACCGGAGC CGCAGCGGCA CGCGCCACGA CTCTGATCAA TATTGCCAGG
GCGCTTGGCC TGGAGATGAT GCTGGTTCCT CAGGCGATGG TTCCGGCCAT CCAGGCGCTA
CTCAGCCCGC AGGGCGACGA CGACCGGCCG GCTTTCAGCC CACAAGCGGA GGGTGATGAT
GAATAA
 
Protein sequence
MKAEAEALDM IGDHFRRARL AAGLTQEQVA DLAGISRPRY RDVETGAAAA RATTLINIAR 
ALGLEMMLVP QAMVPAIQAL LSPQGDDDRP AFSPQAEGDD E