Gene Smed_5801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_5801 
Symbol 
ID5320103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009621 
Strand
Start bp774892 
End bp775248 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content63% 
IMG OID640777504 
Producthypothetical protein 
Protein accessionYP_001314436 
Protein GI150377841 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.149673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00974711 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGCCGA CTGAAATCAA GGTCGGCCAC GTCTTCCGGT ATTCGTATCT CTGGCACTGG 
CAACACCTCG AAGGCCGCGA AGAGGGCGAC AAGGATCGGC CCTGCCTGGT GCTGGCGTTG
GTCACCACGC TTGAGGACGG CACGCCGGTC GTGCGCGTGC TGCCGATCAC CCATACGCCG
CCGGCCCGCG CTGACGAGGC GATCGAGATC CCGCCGGCGA TCAAGCGGGT CGACGCCAAA
CGACTCCACT ATGGCCCTGC CTCCGTGAGC CATCCACCGC ATCGTCGGAG CTCGGTTCAA
ATCTCCCTCG AGAAAGTCCA AGAGCCCTTG TTCGCGATAG CTCATAATGA TCGCTGA
 
Protein sequence
MLPTEIKVGH VFRYSYLWHW QHLEGREEGD KDRPCLVLAL VTTLEDGTPV VRVLPITHTP 
PARADEAIEI PPAIKRVDAK RLHYGPASVS HPPHRRSSVQ ISLEKVQEPL FAIAHNDR