| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5798 |
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| Symbol | |
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| ID | 5320100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 772623 |
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| End bp | 773378 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777502 |
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| Product | gluconate 5-dehydrogenase |
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| Protein accession | YP_001314434 |
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| Protein GI | 150377839 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.475551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00243591 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACTC GACTTTTTGA CCTGACGGGC AAGCGCGCCC TCATCACCGG CTCCTCGCAA
GGGATTGGTT ATGCCTTGGC AAAGGGGCTT GCTGCGGCCG GCGCCGCGGT CATCCTGAAC
GGCCGCGACG AGGCAAGGTT GAGGGCGGCA GCCGAGAGTC TTGGGGCAGG GCATACACTC
GCCTTCGACG CGACGGATCA CGCGGCCGTG CGCAAGGCTA TCGACGCCTT CGAGGCGGAG
ACCGGTGCGA TCGACATCCT CGTCAATAAT GCCGGCATGC AGCACCGTAC GCCGCTGGAG
GACTTCCCCG CCGATGCTTT CGAGCAAATC CTGAAGACAA ACATATCGAC CGTCTTCAAT
GTCGGCCAGG CCGTGGCCCG CCATATGATC AGGCGCGGCG CCGGCAAGAT CATCAATATC
GCAAGTGTCC AGACGGCACT CGCCCGCCCC GGTATTGCGC CCTATACCGC AACCAAGGGT
GCGGTGGGCA ATCTCACCAA GGGTATGGCG GCGGATTGGG CCAAACACGG CCTGCAATGC
AACGCGATCG CGCCCGGCTA TTTCGACACG CCGCTGAACG CCGCTCTTGT CGCCGACCCG
GCCTTTTCCG CCTGGCTCGA AAGCCGCACT CCGGCTGGCC GCTGGGGCAG GGTCGAGGAA
TTGGTCGGCG CCTGCATCTT CCTCTCGTCG GACGCCTCCT CATTTGTAAA TGGACACGTG
CTCTATGTGG ACGGCGGCAT CACCGCGTCG CTCTGA
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| Protein sequence | MSTRLFDLTG KRALITGSSQ GIGYALAKGL AAAGAAVILN GRDEARLRAA AESLGAGHTL
AFDATDHAAV RKAIDAFEAE TGAIDILVNN AGMQHRTPLE DFPADAFEQI LKTNISTVFN
VGQAVARHMI RRGAGKIINI ASVQTALARP GIAPYTATKG AVGNLTKGMA ADWAKHGLQC
NAIAPGYFDT PLNAALVADP AFSAWLESRT PAGRWGRVEE LVGACIFLSS DASSFVNGHV
LYVDGGITAS L
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