| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5797 |
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| Symbol | |
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| ID | 5320099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | + |
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| Start bp | 770950 |
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| End bp | 772425 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640777501 |
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| Product | amidohydrolase |
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| Protein accession | YP_001314433 |
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| Protein GI | 150377838 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00332293 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATGGGC TCCTGCTGCT TCACGGGACG ATCGTGACCG TCGACGACAA ACGGCGGATC
ATCGAGGACG GAGCGCTGGC GGTCGAGAAC GACAAAATCG TCGACATCGG CACATCGCAA
GCGTTGGCTC CGCGCCATGC CGGAAAGAAG GTGATCGACT GCCGGGGAAA GATTATCATT
CCCGGATTGA TTGATGCTCA TGGACATGCC GGTCACGCTC TGATCCGCAG CATTGGTGCC
GACACCAATG CGCTCTGGAT GCGTATCGTC ACCCCGACCT ATTATCACTA TGTCACCCGC
GATTACTGGT ATGCGGACGG CCTGGTTTCC GGCCTGGAAC GGCTTCGAGC GGGTGTGACC
ACCTCGGCCA GCATCGTCAC GTCGATGCCG CGCAGCGACG ACCCGGTTTT TGCGATTAAT
CACGCACGCG CCTATTCGGA ACTGGGCCTG CGCGAGATCA TCTGCGTCGG CCCTGCGGGC
CTGCCCTGGC CGCAATCGGT CACACGCTGG GAAAGCGGCA AGCCGGAGCG GCGCAGCGTT
TCCTTCGAGG CAATGATGGA GGGCGCGGAA GCCGTCATCG AAAGCCTGAA CGGAACGTCC
GAAGGGCGCA TCAAGGTCTT TTTGACGCCA TTCACCATCG TGCCTTCCGT GGAACCGTCG
AACGCCTCGA CACCGGATTT CGCCGTCAAT CTGACGGAAG ACGACCGGAT GCAGGCGCGC
CGCATCCGCG AAACCGCACG CAAGTGGGGC GTGCGCATTC ATTCCGATGC TTTCGCCGGA
CAGATACGCA TGGCCTGGCA GGACAGGGAG AATGCGCTGC TCGGTCCGGA TGTGCACCTG
CAGCATTGCT GGGGAATTTC CCACGAAGAG ATCGACATCC TGGCCGAAAC CGGCACCCAT
GTCACCCATG CGCCGCCGGG ACGCAGCACC CCGGTCATGC AGATGATGGC CCGGGGTGTG
TCGGTCGCAA TCACGTCGGA CGGCGCGGCT CCGAGTCGCC ATTTCGATAT GTTCCAGATC
GCGCGTACCG CGCAGGCCAC CCAGCACATC CTGCATAATC ATGACCGCTA CATCCTGCCG
CCGGGCAAAA TCTTCGAGAT GATCACCATC GACGCGGCCC GCGCCATCGG CATGGGTCAC
GAGATCGGTT CGCTCGAGGT GGGCAAGAAG GCGGACATCG CCGTCATAGA CATGCGCAAG
CCGCATCTGA CGCCCAACTG GATGCCCGTG CACCGGCTGA TCCATCAGGT GCTCGGAAGC
GACGTCGACA CGGTGATCGT CGACGGCAGG ATCATCATGG AGGAAGGCAA GGTCCTGACG
GCCGACATGT ACGAGGCGCT TGCATTCGGG GAGGCCGAAG CGAAGGCCCT TGTGGAACGG
GCCGGTTTGC AGGCCCACAT GCACGATCCC GGCTGGGGGC AATTACATCG GACCTTTGAA
AGACCTGTTC CGCTCCCGAC ACCGCCGGAT TGTTGA
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| Protein sequence | MDGLLLLHGT IVTVDDKRRI IEDGALAVEN DKIVDIGTSQ ALAPRHAGKK VIDCRGKIII
PGLIDAHGHA GHALIRSIGA DTNALWMRIV TPTYYHYVTR DYWYADGLVS GLERLRAGVT
TSASIVTSMP RSDDPVFAIN HARAYSELGL REIICVGPAG LPWPQSVTRW ESGKPERRSV
SFEAMMEGAE AVIESLNGTS EGRIKVFLTP FTIVPSVEPS NASTPDFAVN LTEDDRMQAR
RIRETARKWG VRIHSDAFAG QIRMAWQDRE NALLGPDVHL QHCWGISHEE IDILAETGTH
VTHAPPGRST PVMQMMARGV SVAITSDGAA PSRHFDMFQI ARTAQATQHI LHNHDRYILP
PGKIFEMITI DAARAIGMGH EIGSLEVGKK ADIAVIDMRK PHLTPNWMPV HRLIHQVLGS
DVDTVIVDGR IIMEEGKVLT ADMYEALAFG EAEAKALVER AGLQAHMHDP GWGQLHRTFE
RPVPLPTPPD C
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