| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5791 |
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| Symbol | |
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| ID | 5320093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 762592 |
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| End bp | 763785 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640777496 |
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| Product | cytosine deaminase |
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| Protein accession | YP_001314428 |
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| Protein GI | 150377833 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.159101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000445304 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGACC TTTTGCTCCG CAACGTCAGG CCCATGGCAG GCGAAAGCTG CGATATCCTG
ATTAGGGACG GAAAGATCGC CGGTTTCGGG CGTTTTGAAG CGGAACCAGG CATGGCCGTG
GAAGATGGCG GCAACGCCAT CGCCGCCCCC GGGCTGATCG ATGCGCATAC CCATCTCGAC
AAGACGACCT GGGGCATGCC GTGGCATGTC AACAACCGCG CCGCAGTCCT GCGTGAGCGT
ATCGATTTCG AACGCGAGCA TCGTCTGGAG ATCGGCATCG ATCCGCACCG CCAGTCGATG
CGTCATGCGA TCGGTCTGGC CGCGCATGGC GCAACGCATA TCCGAAGCCA TGTCGATATC
GATCCGGTTC ATCGCCTGTC GCTGGTCGAG GGCGTCTGGG AAACGCGCGA GAAGCTCAGG
GGCATCATCG ACATCGAAAT CGTCGCGTTT CCCCAATCAG GCCTGATGGT CATGCCCGGC
ACGAAGGAGT TGCTCGACGA GGCGCTGCGT CAGGGCTGCG AAGTGCTGGG CGGCATCGAT
CCGTGCGGGA TAGACCGCGA TCCGAAGGGC CAGCTCGACA TTCTGTTTGC ACTCGCCACC
AAGCATGGCG TTCCGATCGA CATTCACCTG CATGAGACGG GCGATCTCGG CGCCTTCACC
ATGGAACTCA TCTTCGAGCG GATCCGCGCC AACGGCATGG AAGGCAAGGT GGCAATCAGC
CACGCCTTTG CGCTCGGCAT GAACGACTAT CTGCGCGTCG GCCAGCTGAT CGAGCAGCTC
GCTATTCTCG ACGTCGCGAT CCTCACCACC GGCGCGCCTT CGGCCACGGT GCCCTCGATC
AAGCGCCTGA AGGAAGCGGC CGTGCGCGTC GGCGGCGGCT GTGACGGTAT CCGTGACACC
TGGGGACCAT GGGGCCAGCC GGACATGCTG GACCGCGCCA AGGTTATCGG CATGAAGAAC
GGCGTGCGCT CGGATCACGA TCTGGAGCAT TTGCTGCACA TCGTCTCGCA AGGCGGTGCG
GATATCATGC GGCTTGAAAA TTACGGCCTT GAAGTCGGCC GCGATGCGGA CTTCACCCTG
TTGACCGGCG AGACGCTGGC GCATGCCGTG GTCGATGTCG CCCCGCGTCC GCTGGTCGTC
AAAGGGGGTC GCGTCACGGC CCGTCAGGGT GTCGCCGTCG TGGAGATGCC GTAA
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| Protein sequence | MNDLLLRNVR PMAGESCDIL IRDGKIAGFG RFEAEPGMAV EDGGNAIAAP GLIDAHTHLD
KTTWGMPWHV NNRAAVLRER IDFEREHRLE IGIDPHRQSM RHAIGLAAHG ATHIRSHVDI
DPVHRLSLVE GVWETREKLR GIIDIEIVAF PQSGLMVMPG TKELLDEALR QGCEVLGGID
PCGIDRDPKG QLDILFALAT KHGVPIDIHL HETGDLGAFT MELIFERIRA NGMEGKVAIS
HAFALGMNDY LRVGQLIEQL AILDVAILTT GAPSATVPSI KRLKEAAVRV GGGCDGIRDT
WGPWGQPDML DRAKVIGMKN GVRSDHDLEH LLHIVSQGGA DIMRLENYGL EVGRDADFTL
LTGETLAHAV VDVAPRPLVV KGGRVTARQG VAVVEMP
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