| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5789 |
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| Symbol | |
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| ID | 5320091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 760123 |
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| End bp | 761106 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640777494 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001314426 |
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| Protein GI | 150377831 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.844773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00122785 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGTGACA TGCAGGAACC AGTCGTCGAA GTCCGCAATC TGCGTGTGGA TTTTCCCGGC
CGCCACGGCA CCGTAACGGC GCTGTCGGGT ATCAGCCTGT CGATTCGGCC GGGCGAAATA
CTCGGTGTCG TGGGCGAATC CGGCGCAGGG AAATCCATGA CGGGGCTTGC CATTCAGGGT
CTGCTCGAAG CGCCGGGCCA TATTGCCGGC GGCGAGGTCT GGCTCGGTGA GAGCCGCATC
GATACGCTCG ACGACCGCGC CATGGAAAAG ATCCGCGGCC GCGAGATCGG CGCGATCTTT
CAGGACCCCC TCACCTCGCT CAATCCGCTG TTCACGGTCG GCGCTCAGCT CGTCGAAACC
ATTCGCCGGC ATCTCGGTCT TGGTAAGGCC GAAGCCCGTG CCCGCGCCGT GCAACTGCTG
CGCGATGTCG GCATTCCTTC GCCTGAGGAC CGGGTCAACC AGTATCCGCA TCAGTTCTCG
GGCGGCATGC GCCAGCGTGT CGTGATCGCA CTTGCGCTTG CGGCGTCGCC GAAACTCGTC
ATCGCCGACG AACCTACCAC GGCGCTCGAC GTGTCGATCC AGGCGCAGAT CATTTCGCTC
CTTCGCAAAT TGTGCAAGGA GAAGCAGACC GCCGTCATGC TCGTCACGCA CGATATGGGC
GTGATCGCGG AAGCTGCCGA CCGCATTGCG GTCCTGTATG CCGGACGGCT AGTCGAGATC
GGGCCCGTCG AGCAGGTGCT GCACCAGCCG CGCCATCCCT ATACGCAAGG TCTTATGGCT
TCGATTCCGT CGCTGGGTGC GCGGGTCGAG AGGCTCAACC AGATCGACGG CTCCATGCCG
CGCCTGGACG CCATACCCGA CGGCTGCGCC TTCAATCCGC GCTGCAGCAT GGCAGGTCCG
CGCTGCCGGC GCGAGCAGCC GGAGCTTGTT TTTGCAGGCC ATAGTGCAAG CGCATGCTGG
CTGAACGCAG GAGGCACCGC ATGA
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| Protein sequence | MGDMQEPVVE VRNLRVDFPG RHGTVTALSG ISLSIRPGEI LGVVGESGAG KSMTGLAIQG
LLEAPGHIAG GEVWLGESRI DTLDDRAMEK IRGREIGAIF QDPLTSLNPL FTVGAQLVET
IRRHLGLGKA EARARAVQLL RDVGIPSPED RVNQYPHQFS GGMRQRVVIA LALAASPKLV
IADEPTTALD VSIQAQIISL LRKLCKEKQT AVMLVTHDMG VIAEAADRIA VLYAGRLVEI
GPVEQVLHQP RHPYTQGLMA SIPSLGARVE RLNQIDGSMP RLDAIPDGCA FNPRCSMAGP
RCRREQPELV FAGHSASACW LNAGGTA
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