| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_5785 |
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| Symbol | |
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| ID | 5320087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009621 |
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| Strand | - |
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| Start bp | 756905 |
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| End bp | 757630 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640777490 |
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| Product | Asp/Glu racemase |
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| Protein accession | YP_001314422 |
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| Protein GI | 150377827 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4126] Hydantoin racemase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.415529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00131329 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCATATTC ATCTGATCAA TCCCAATTCG ACAGCTTCCA TGACGACGCA GGCGCTGGAA
AGTGCCTTGC TGGTCAAGCA CGCTCACACC CGCGTCTCTG CCTCCAATCC GACGGATACG
CCGGTTAGTA TCGAGGGTGG CGCCGACGAG GCAATGGCGG TGCCGGGAAT GCTGGCGGAA
ATCCGCCAAG GCGAGGCGCA GGGCGTCGAC GCCTATGTCA TTGCCTGTTT CGATGATCCC
GGACTGCACG CAGCGCGCGA AGTCGCCAAG GGGCCCGTGA TCGGCATCTG CCAGGCCGCG
GTCCAGGTAG CCATGACGAT CAGCCGCCGC TTCTCGGTCA TAACCACCCT CCCCCGCTCG
GTTCCGATCA TCGAAGATCT GATAAGTGAT TACGGTGCGG AGCGTCACTG CCGAAAAGTA
CGTGCCATCG ATCTTCCGGT CCTTGCCCTC GAGGAAGATC CGCAAAAGGC CGAGCGGCTC
CTGCTGCAGG AAATCGAGCT GGCCAAGGCA GAAGATGGCG CCGAAGCGAT TGTGCTCGGC
TGTGCGGGAA TGTCGTCGCT ATGCGACCGT CTCAAGGAGG CGACAGGCGT GCCGGTGATC
GATGGTGTGA CTGCCGCAGT CAAAATGGCG GAAGCGCTAA TCGGAGCAGG ATATACGACC
TCCAAGGTCA ACACTTACGC CTATCCGCGG ATCAAAGCCG CAGTCGGTCA CAAGGTTTGC
GCTTAG
|
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| Protein sequence | MHIHLINPNS TASMTTQALE SALLVKHAHT RVSASNPTDT PVSIEGGADE AMAVPGMLAE
IRQGEAQGVD AYVIACFDDP GLHAAREVAK GPVIGICQAA VQVAMTISRR FSVITTLPRS
VPIIEDLISD YGAERHCRKV RAIDLPVLAL EEDPQKAERL LLQEIELAKA EDGAEAIVLG
CAGMSSLCDR LKEATGVPVI DGVTAAVKMA EALIGAGYTT SKVNTYAYPR IKAAVGHKVC
A
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